Herbaspirillum hiltneri: F506_13260
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Entry
F506_13260 CDS
T04039
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
F506_13260
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
RecA
AAA_22
AAA_16
GvpD_P-loop
nSTAND3
AAA_24
MEDS
IstB_IS21
DnaB_C
AAA_18
AAA_30
SLFN-g3_helicase
AAA_29
FitA-like_RHH
Motif
Other DBs
NCBI-ProteinID:
AKZ65358
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Position
2928463..2929986
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AA seq
507 aa
AA seq
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MATQQNHLTPDRAPDPTSTRSATGISGLDIILGGGITRDRLYLVEGTPGTGKTTFGLQFL
LEGLKQGEPGLYITLSETATELRAVAASHGWSLEGLSLYELIDEEDLNPDFQQSILHPSE
IELGETIKNVIARVDELKPARVIFDSLSEMRLLAQNPLRYRRQILALKHFFSTRKCTVLM
LDDRTAEAGDLQLHSIAHGVISLEQLAQDFGTERRRLRVIKMRGISFSGGYHDFVLKTGG
MHVFPRLIAADHFADFENSMATTGVPGLDVLLGGGLVRGTNTLLSGPSGVGKTTTALRCT
LGALERGETAAYYLFDEGVGTLIARARALGMDIDPYLADGSLALHQINPAEMSPGEFSAT
LRNAVEKEGRTFVVIDSLNAYLQGMPGEKYLLLQMHEMLSYLNQQGVTTMLVLGQHGLVG
EIRSDIDLSYLSDAILLFRFFEVRGDIATAISVVKSRASHHPRSIHEFRLSPNQGLQVGE
PLQDFEGIMSGLPTYRGRTPMLATDAD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaacaaaaccacctcacaccggatcgcgcaccagatccaacatcgacccga
tccgcgaccggcatcagcggcctggacatcatcctcggcggcggcattacacgcgatcga
ctctaccttgtcgaaggcaccccgggaacgggcaagaccaccttcggcttgcagttcctg
ctggaaggactgaaacagggcgagccgggtctctacatcacgctgtcggaaacggccacg
gaattgcgcgcggttgccgcgtcgcacggctggtcgctggagggattgtcgctgtacgaa
ctgatcgacgaggaagacctcaatccggatttccagcaatcgatcctgcatccgtctgaa
atcgaactgggcgaaaccatcaagaacgtgatcgcccgggtcgatgaactcaagccggcc
cgcgtgatcttcgacagcttgtcggaaatgcgcctgctggcgcagaatccgctgcgctac
cgtcgccagatcctggcgctcaagcacttcttctccacccgcaaatgcaccgtgctgatg
ctcgatgaccgcaccgccgaggccggtgacttgcagttgcacagtatcgcccacggcgtg
atcagcctggagcaactggcccaggatttcggcaccgaacgtcgccgcttgcgggtaatc
aagatgcgcggcatcagtttcagcggcggctatcatgacttcgtgctgaagaccggcggc
atgcacgtcttcccgcggctgatcgctgcagaccatttcgccgactttgaaaacagcatg
gccaccaccggcgtaccggggcttgacgtcctgctcggcggcggtctcgtgcgcggcacc
aataccctgctcagcggcccatccggagtcggcaagaccaccacggcattacggtgcacg
ctgggagcactggagcgcggagaaaccgccgcctattacctgtttgacgaaggagtcggc
accttgatcgcccgcgcccgcgcgctgggcatggacatcgatccctacctggcggatggt
agccttgcgttgcatcagatcaatccggctgaaatgtcgccgggagaattctccgccacg
ctgcgcaatgcggttgagaaggaaggccgcacctttgtcgtgatcgatagcctcaacgcc
tatctgcaagggatgccgggagaaaaatacctgctgctgcaaatgcacgagatgctgtcc
tacctgaaccagcaaggcgtcaccacgatgctggtgctgggccagcacggcctggtcggg
gaaatccgttcggacatcgacctcagctatctcagcgacgccatcctgctgttccgtttc
ttcgaggtgcgcggcgatatcgccaccgccatctcggtcgtcaagagccgcgccagccat
catccccgttccatccacgagtttcgcctcagtccgaaccagggtctgcaggtaggcgaa
ccgctacaggatttcgaaggcatcatgagcggcttgccgacttaccgcggcaggaccccc
atgctggccaccgatgccgattaa
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