Herbaspirillum hiltneri: F506_13400
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Entry
F506_13400 CDS
T04039
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht03420
Nucleotide excision repair
hht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F506_13400
03430 Mismatch repair
F506_13400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_13400
Enzymes [BR:
hht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F506_13400
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F506_13400
MMR (mismatch excision repair)
Other MMR factors
F506_13400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AKZ63530
LinkDB
All DBs
Position
2960353..2962428
Genome browser
AA seq
691 aa
AA seq
DB search
MNVDYLEKLNPEQRQAVEFGITPGQPAAPPARPLLVIAGAGSGKTNTLAHRVAHLIVNGA
DPRRILLMTFSRRAAAEMTRRVQRICGEALGANGRIMADALSWAGTFHGIGAQILREYAD
QIGLDPNFSIHDREDSADLMNLVRHELGLSRTEKRFPLKATCLAIYSRVVNSEAPLDSIL
HKVFPWCAEWEAQLRTLFGAYVEAKQAHNVLDYDDLLLYWAQTIGERVLADDIGARFDHV
LVDEYQDTNRLQSSILLALKPDGRGLTVVGDDAQAIYSFRAATVRNILDFPRAFDPPADI
VTLDRNYRSTQPILAAANSVIDKALERFTKNLWTERVSDHKPQLVSVRDEADQARYIVER
ILENREAGSTLKDQAVLFRASDHSGPLEIELVRRNIPFVKFGGLKFLDSAHVKDMLAMLR
FVQNPRDRVAGFRLMQLLPGVGPGSAQKVLDAMAAHADPIAALSELPAPPRSGDDWRGFV
EVLQFMAQGKTGWPGEIAHARSWYAPHLERKHEDATTRQADLLQLEQIASGYPSRERFLT
ELTLDPPDATSDQSGVPLLDEDYLILSTIHSSKGQEWKSVYVLNVVDGCIPADLATGSTD
EIEEERRLLYVAMTRAKDDLHLMVPQKFFTGGQHAQGDRHVYASRTRFIPPGVLPHFASS
AWPVVAVGPSGRPDARQMRVDVAARMRGMWK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgactatctggagaaactcaaccccgaacaacgtcaggcggtggaattcggc
atcacgccgggccaaccggcggcgccccctgcccgtcccttgctggtgattgccggcgcc
ggttcgggcaagaccaatacgctggcgcaccgggtcgcccatttgatcgtaaatggcgcc
gatccacgccgcattttgctgatgactttttcacgccgcgccgccgcagaaatgacgcgc
cgcgtccagcgcatctgcggcgaagcgctcggggccaacggccgcatcatggccgatgca
ttgtcctgggccggcaccttccacggcatcggcgcgcagatcctgcgcgaatatgcggat
cagatcggactcgatcccaatttctccatccacgaccgcgaagattcggccgacctcatg
aatctggtgcggcatgaactgggcttgtccaggaccgaaaaacgcttcccgctcaaggcg
acctgcctggcgatctactcgcgcgtagtgaattccgaagcgccgctggacagcatcctg
cacaaggtttttccgtggtgtgcggaatgggaggcgcagctgcgcacgctgttcggcgcc
tatgtcgaagccaagcaggcgcacaacgtgctcgactacgacgacctgctgctgtactgg
gcgcagaccatcggcgaacgcgtgctggcagacgacatcggcgcgcgcttcgatcacgtg
ctggtggatgaataccaggacaccaaccgcctgcaatcgtcgatcctgctggcgctgaaa
ccggacggccggggcctcacggtggtcggcgacgacgcccaggcgatctactcgttccgt
gccgcgacggtgcgcaacatcctcgactttccgcgcgccttcgatccgccggccgacatc
gtcacgctcgatcgcaactaccgctcgacgcagccgatcctggccgcggccaacagcgtg
attgacaaggcgctggaacgcttcaccaagaacctctggaccgagcgcgtctccgaccac
aagccgcagctggtatcggtgcgcgacgaagccgaccaggcgcgctacatcgtcgaacgc
atacttgagaaccgcgaagccggcagcacgctgaaggatcaggcggtgctgttccgcgcc
tccgaccacagcggtccgcttgaaatcgaactggtgcgccggaacattcccttcgtcaaa
ttcggcggtctcaaattcctcgacagcgcgcacgtcaaggacatgctggcgatgctgcgc
ttcgtgcaaaatccgcgtgaccgcgtggccggattccgtctgatgcagttgctgcccggc
gtcggtccgggttcggcgcaaaaggtgctggacgccatggcggcgcatgccgatccgatt
gccgcgttgtccgaattgccggcgccgccacgcagcggcgacgactggcgcggcttcgtc
gaggtgctgcagttcatggcgcaaggcaagaccggctggcccggcgagatcgcgcatgcg
cgcagctggtacgcaccgcacctcgaacgcaagcatgaagacgccaccacgcgccaggcc
gacctgctgcaactggagcagatcgcctccggctatccctcgcgcgagcgcttcctgacc
gaacttacgctcgatcctccggacgccaccagcgaccagtcgggcgtgccgctgctggac
gaggattacctgatcctgtcgaccatccattcttccaaaggccaggaatggaaatcggtc
tatgtgctcaacgttgtcgacggctgcatcccggccgatctggctaccggcagcactgat
gaaatcgaagaggaacgccgcttgctctacgtcgccatgacgcgcgccaaggacgacctg
catctgatggtgccgcagaaattcttcaccggcggccagcacgcgcaaggcgaccggcat
gtctacgcatcgcgcacgcgcttcattccgcccggcgtgctgccgcatttcgccagtagc
gcatggccggtggtcgcagtcggcccgagcggacgccccgatgcgcggcagatgcgcgtc
gacgtggcggcgcgcatgcgcgggatgtggaaatga
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