Herbaspirillum hiltneri: F506_18360
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Entry
F506_18360 CDS
T04039
Name
(GenBank) lytic murein transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hht01011
]
F506_18360
Enzymes [BR:
hht01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
F506_18360
Peptidoglycan biosynthesis and degradation proteins [BR:
hht01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
F506_18360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AKZ64360
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Position
4040816..4042342
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AA seq
508 aa
AA seq
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MQLTFRKLAIATLFSLGTPLLAHANDISIYPAAFNAINPNDPSSALPGMEDIDIWARIRK
GFGIPNLENPLVDNQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIE
SAFNPQALSTAKAAGMWQFIPSTGRDYNLKQNLFTDERRDVLASTDAALTYLQKLYGMFG
DWQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIAMP
GDFGIDLPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGDDTK
ILLPESNAEKFKTNMSKFTQALSSWTAHTVSSARERIETIASRFGTTPDVIRSVNQIPPK
MVLKAGSMILVPKTETSMEADITPEMADSARLAVAPDVPDFKRIYVKAGKRDTLASIASR
YRVSVVQIKQWNSLHRDTLANGQSLQLQVPYQTPAAAPIRVRQVIHAPAKPIRKAPAVVA
KNTRAAPAPARKGAAQITLASESGNRRR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcagctaacattccggaaactggcgatcgcaacgcttttctctctcggtacccccctc
ctggcccacgccaacgacatctcgatctaccccgcagctttcaacgccatcaatccgaac
gatccttcgtccgcgctgccgggcatggaagacatcgatatctgggcgcgcatccgcaag
ggcttcggcattcccaatctggaaaacccgctggtcgacaaccagacccagtggtatagc
tcgcgccctgactatatccagcgtaccaccgtgcgtgcatcgcgctatctgttccacgtc
gtgcaggaactcgaaaagcgcggcatgccgaccgaactggcgctgctgccgttcatcgaa
tccgccttcaacccgcaagcgctgtcgaccgccaaagcggccggcatgtggcagttcatt
ccctcgaccgggcgcgactacaacctgaagcaaaacctgttcaccgacgagcgccgcgac
gtgctggcctcgaccgatgcagcgctgacctacctccagaaactctatggcatgttcggc
gactggcaactggcgctggccgcgtacaactggggtgaaggctcggtgcagcgcgccgtc
aaccgcaacctggccgccggcctgccgatcgatttcaacacgctgtcggcgcaaatgccc
aacgagacgcgcaactacgtgccgaagctgcaagccgtcaagaacatcatcgccatgccg
ggcgacttcggcatcgacctgcccaaggtcgacaaccagccctacttcgtcaccatcggc
aagacccgcaacatcgacgtgaaggtggctgcgcaactggccgaattgtcgctcgacgag
ttcaaggcgctcaacccgcagttcaaccgcccggtcatcatcggcggcgacgacaccaag
atcctgctgccggaaagcaacgccgagaagttcaagaccaacatgtccaagttcacgcag
gcgctgagctcgtggaccgcccataccgtgtcgagtgcgcgtgagcgcatcgaaaccatc
gccagccgcttcggcaccacgccggacgtgattcgcagcgtcaaccagatcccgccgaag
atggtcctgaaagccggctccatgattctggtgccgaagaccgaaacctcgatggaagcc
gacatcacgcctgaaatggccgacagcgcccgcctcgccgtggcgccggacgtgcccgac
ttcaagcgtatctacgtgaaggccgggaagcgcgatacgctggcctcgatcgccagccgc
taccgcgtcagcgtggtccagatcaagcaatggaacagcctgcaccgcgacacgctggcc
aacggccaaagcctgcagctgcaagtgccttaccagacgcctgccgccgcgccgatacgc
gtacgccaggtcatccatgccccggccaagcctatccgcaaggcgcccgccgtggtggcc
aagaacacccgcgccgcgccggcgccggcgcgcaaaggcgccgcgcagatcacgctggcg
tcggaaagcggcaaccgccgccgctga
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