Herbaspirillum hiltneri: F506_18885
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Entry
F506_18885 CDS
T04039
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht00220
Arginine biosynthesis
hht00240
Pyrimidine metabolism
hht00250
Alanine, aspartate and glutamate metabolism
hht01100
Metabolic pathways
hht01110
Biosynthesis of secondary metabolites
hht01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
F506_18885 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
F506_18885 (carB)
00220 Arginine biosynthesis
F506_18885 (carB)
Enzymes [BR:
hht01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
F506_18885 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AKZ64446
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Position
complement(4166729..4169962)
Genome browser
AA seq
1077 aa
AA seq
DB search
MPKRNDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM
ADVTYIEPITWQVVERIIAKEKPDAILPTMGGQTALNCALDLHRNGVLEKYGCELIGASP
EAIDKAEDRSKFKDAMTKIGLGSARSGVSHSLEESWAVQKELGFPVIIRPSFTMGGTGGG
IAYNAEEFETICKRGLEASPTTELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP
RFAFEKFPQADNHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDHETIK
EELGEPGPDRIWYVGDAFAQGFTLEEVHGLTHIDPWFLSQIKEIVDIELWLENGQTLEGL
DKATLYKLKQKGFADRRLAKLLKVTDTAVREKRHALNIRPVYKRVDTCAGEFSTNTAYMY
STYEEECESKPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPET
VSTDYDTSDRLYFESLTLEDVLEIVALEKPVGVIVQYGGQTPLKLALDLEANGVPIVGTS
PDMIDAAEDRERFQKMLQDLGLRQPPNRTARTEADALRLAQEIGYPLVVRPSYVLGGRAM
EIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVMEHIEQA
GVHSGDSACSLPPYSLAKDTIDELKRQTALMAKGLNVVGLMNVQFAIQQTEVDGKLQDVV
FVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVIPPYFSVKEAVFPF
VKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGVKLPTSGKVFLSVKGSDKPRA
VQVAKDLVGLGFLIVATKGTASAISAAGIPVTTVNKVVEGRPHIVDMIKNNEITLVVNTV
EEKRTAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLDALDVYDLQGLHKAIH
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgtaacgacattaaaagcatcctgatcatcggcgccggtccgatcatcatc
ggtcaggcctgcgaatttgactattccggtgcgcaagcctgcaaggcgctgcgtgaagag
ggctacaaagtcattctggtcaacagcaatcccgcgaccatcatgaccgaccctgaaatg
gccgacgtcacctacatcgagccgattacctggcaagtggtggaacgcatcatcgccaag
gaaaagccggacgcgatcctgccgaccatgggcggccagaccgcgctgaactgtgcactc
gatctgcaccgcaacggcgtgctcgaaaaatacggttgcgaactgatcggcgcctcgccg
gaagccatcgacaaggccgaagaccgctccaagttcaaggacgccatgaccaagatcggt
ctgggttccgcacgttcgggcgtatcgcattccctggaagaatcatgggccgtgcagaag
gaactgggcttcccggtcatcattcgcccatcgttcaccatgggcggcaccggcggcggc
atcgcctataacgccgaagaattcgaaaccatctgcaagcgcggcctggaagcatcgccg
accaccgaactgctgattgaagaatcgctgatcggctggaaagagtacgagatggaagtc
gtgcgcgacaaggccgacaactgcatcatcgtctgctcgatcgaaaacctggatccgatg
ggcgtgcataccggcgactccatcacggtcgccccagcgcaaacgctgaccgacaaggaa
taccagatcatgcgtaacgcctcgctggcggtgctgcgtgaaatcggcgtcgacaccggt
ggctccaacgtgcagttctcggtcaatccggccgacggccgcatgatcgtcatcgaaatg
aatccgcgcgtgtcgcgttcgtcggcgctggcttcgaaagcgaccggtttcccgatcgcc
aagatcgctgccaagttggcggtcggtttcacgctggacgagctgcgcaacgaaatcacc
ggcggcgcgaccccggcttcgttcgaaccgtcgattgactacgtcgttaccaagattccg
cgctttgcgttcgagaagttcccgcaagccgacaaccatctgaccacgcaaatgaagtcg
gtcggtgaagtcatggcgatcgggcgcaccttccaggagtcgttccagaaagcgctgcgc
ggcctggaagtcggcgttgacggcatgaacgaaaagaccaccgaccacgaaaccatcaag
gaagaactgggcgagcccggtcccgaccgtatctggtacgtgggcgatgcattcgcgcaa
ggtttcacgctggaagaagtgcatggcctgacgcacatcgatccgtggttcctgtcgcag
atcaaggaaatcgtcgacatcgaattgtggctggaaaatggccagacactggaaggcctg
gacaaggcgacgctgtacaagctcaagcaaaagggcttcgccgaccgtcgcctggccaag
ctgctgaaggtcaccgacaccgccgtgcgcgagaagcgccatgcgctgaacatccgtccg
gtctacaagcgcgtcgatacctgcgcgggcgaattctcgaccaacacagcgtacatgtac
tcgacctatgaggaagagtgcgaatcgaagccgaccgacaagaagaagatcatggtgctg
ggcggcggtccgaaccgcatcggccagggcatcgaattcgactattgctgcgtccacgct
gcgctggcaatgcgcgaagacggttacgagaccatcatggtcaactgcaatccggaaacc
gtctcgaccgactacgacacgtccgaccgtctgtacttcgaatcgctgacattggaagac
gtgctggaaattgtcgcgctggaaaaaccggtcggcgtgatcgttcagtacggcggccag
accccgctgaagctggcgctggatctggaagccaacggcgtgcctatcgtcggcacctcg
cctgacatgatcgacgccgccgaagaccgcgagcgtttccagaaaatgctgcaggacctc
ggtctgcgccagccgccgaaccgcaccgcacgcacggaagccgacgcactgcgcctggcg
caggaaatcggttatccgctggtggtgcgcccttcgtacgtgctgggtggccgcgcgatg
gaaatcgtccacgagcaacgcgacctcgagcgctacatgcgcgaagcggtcaaggtctcg
catgactcgccggtgctgctggaccgcttcctgaacgacgcgatcgaagttgacgtcgac
tgtctgtcggacggcgagcgcaccttcatcggcggcgtgatggaacatatcgaacaagcc
ggcgtgcactcgggcgactcggcttgctcgctgccgccatactcgctggcgaaagacacc
attgacgaactgaagcgccagacagcactgatggccaagggcctgaacgtggtcggcctg
atgaacgtgcagttcgccatccagcaaaccgaagtcgacggcaaattgcaagacgtcgtc
ttcgtgctggaagtgaacccgcgcgcatcgcgcaccgtgccgttcgtctcgaaggcaacc
ggcctgcaactggcgaagatcgccgcgcgctgcatggtcggccagtcgctggacagccag
ggcatcaagaacgaagtgatcccgccttacttcagcgtcaaggaagccgtgttcccgttc
gtgaaattcccgggcgtcgacacgatcctcggacctgaaatgaagtcgaccggtgaagtc
atgggcgtgggcaagaccttcggcgaagccttcgtcaagtcgcagctgggcgccggcgtc
aagctgccgacatcgggcaaggtattcctgagcgtcaagggcagcgacaagccgcgcgcg
gtccaagtggcgaaggacctggtcggtctcggtttcctgatcgttgcgaccaaggggaca
gccagcgccatcagcgccgccggcattcccgtgaccaccgtgaacaaggtggtcgaaggt
cgtccgcatatcgtcgacatgatcaagaacaacgagatcacgctggtggtcaacacggtc
gaagaaaagcgtacggcgattgccgactccggcgccatccgtacttcggcgctggcggcg
cgcgtgacgacgttcacgaccatcgccggcgcagaggctgcggtggaaggcatgcgccat
ctggatgcgctggatgtgtatgatttacaagggctgcataaagctatacactaa
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