Herbaspirillum hiltneri: F506_19320
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Entry
F506_19320 CDS
T04039
Symbol
dppD
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
hht
Herbaspirillum hiltneri
Pathway
hht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F506_19320 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hht02000
]
F506_19320 (dppD)
Transporters [BR:
hht02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
F506_19320 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
SMC_N
TniB
ABC_ATPase
NACHT
ATP-synt_ab
AAA_29
AAA_7
Roc
Motif
Other DBs
NCBI-ProteinID:
AKZ64517
LinkDB
All DBs
Position
complement(4261901..4262905)
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AA seq
334 aa
AA seq
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MHDMITLRDLQVQFFAPKKLIRAVNGVNLTVGQGEVVALIGESGSGKSVTLRSIMRLHSE
RSTRISGGLEVDGKDVLKMSQRELAALRGDTVAMIFQEPLLALDPVYTVGAQIIEAIRRH
KKVSKAEAHRQALSLFQKVRIPSPERRLDAYPHEMSGGMRQRAMIALALSCSPKVLLADE
PTTALDATVQIQILLLLRDLQKELGLSIVFVTHDIGAAAEVADRIAVMYAGKIIEQGPAA
ELLTRPRHPYTLSLLKSRSHGALQKGQRLETIGGAPPDLSNLPAGCAFAERCRYAAAECA
GVQPREETLSPGHVVSCLRVHQIHQINPVAAATH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacatgattaccctgcgcgatctgcaagtgcagttcttcgcgccgaagaaactg
atccgcgccgtcaacggcgtcaacctcaccgtcggccaaggtgaagtggtggccctgatc
ggcgagtccggctcgggcaagagcgtcaccttgcgttccatcatgcgcctgcattccgaa
cgttcgacgcgcatcagcgggggcctcgaagtcgacggcaaggacgtgctgaagatgtcg
cagcgtgagctggcggcgctgcgcggcgacacggtggcgatgattttccaggagccgctg
ctggcgctcgatccggtctacaccgtcggcgcgcagatcatcgaagccatccgccgccac
aagaaagtatcgaaggccgaggcgcacaggcaggcactgagcctgttccagaaagtccgc
attcccagtcccgaacgccgcctcgatgcttacccgcacgagatgtccggcggcatgcgc
cagcgcgccatgatcgcgctggccttgtcgtgctcgcccaaagtcctgctggccgacgag
ccgaccacggcgctcgacgccaccgtgcagatccagatcctgctgttgctgcgcgatctg
caaaaggaactcggcctgtccatcgtcttcgtcacgcatgacatcggcgcagcggcggaa
gtggccgatcgcatcgccgtcatgtacgccggcaagatcatcgagcagggtccggcagcc
gagttgctgacgcggccgcgccatccctacaccttgtcgctgctcaagagccgcagccac
ggcgccctgcaaaaaggccagcgcctggaaaccatcggcggtgcgccgccggacctgagc
aacttgccggccggctgtgcgttcgccgaacgctgccgatatgccgccgccgaatgcgcc
ggcgtgcagccgcgtgaggagacattgtcgccgggccatgtggtgagctgtttgcgtgta
caccagattcatcagatcaacccggtcgccgcagcgacgcattga
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