KEGG   Herbaspirillum hiltneri: F506_20420
Entry
F506_20420        CDS       T04039                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hht  Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:hht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hht03400]
    F506_20420
Enzymes [BR:hht01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F506_20420
    5.6.2.6  RNA 3'-5' helicase
     F506_20420
DNA repair and recombination proteins [BR:hht03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    F506_20420
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AKZ65540
LinkDB
Position
complement(4509688..4512180)
AA seq 830 aa
MERWFAAQGWKIFAFQRDTWQAALRGESGLLHASTGSGKTYAVWFAALQHAVPALAKAGP
LPLTDMPAAGARRTRAINQTGLRILWITPMRALASDTARALEAPLNALLPAWTIGSRTGD
TSGSERARQLRSLPSALITTPESLSLLLSQDDAAARFGKLDAVIVDEWHELMGSKRGVQT
QLALARLRRWRPQLMVWGLSATLGNLQQSKDALLGEGRGVLVQGKTRKKIVVDTLIPAHP
SRFAWAGHLGLQMLPAVAAEIDGHASTLVFTNTRSQAELWYQNLLAARPDWAGLIALHHG
SLDREVRDWVELAIKNGQLKAVVCTSSLDLGVDFAPVERVLQIGSARGVARLLQRAGRSG
HSPGRVSRVTLVPTNTLELLEAAGARHAVAAGQVEQRPVPDTPLDVLVQHLVTIALGGGF
RSQELFDEVRTAYSYRALRPDQWQWALDFVARGGQSLTAYPEYQRVAPDADGVYRVPDAA
IARRHRMSIGTIVSDASMQVQYLRGARIGTIEEGFIARLRAGDRFLFGGRMLEFVRVHEM
TAYVRRATSGSGAVPRWQGGRLPLSSTLAHAVLDCLEEAAHDAYRGPEMQAMQPLLALQQ
QWSALPTARKLVVEHLHSREGHHLFFYPFAGRLVHVGLAALISYRLAQRRAATFSIAVND
YGFELLSATPIDVTDLFPAADMDGALFSSAHLLEDVIASLNATELTQRRFREIARISGLV
FQGFPGQPKSTRQLQASASLFFEVFRKHDAGNLLLTQAQTEVLEQELELQRLRETLEELR
GRSLQVCNIARATPFGFPLMVERFREKLSTEKLSDRVARMLQELEKAAAR
NT seq 2493 nt   +upstreamnt  +downstreamnt
gtggagcgctggttcgccgcgcaaggctggaaaatcttcgccttccagcgcgacacctgg
caagccgccctgcgcggcgagtcgggcctgctgcatgccagcacgggctccggcaaaacc
tatgcggtctggttcgccgccctgcagcatgccgtaccggcgttggccaaagccggtccc
ttgcccttgacggatatgcctgccgccggcgccaggcgtaccagggcaatcaatcagacc
ggcctgcgcatcctgtggatcacgccgatgcgcgcgcttgcgtccgacaccgcgcgcgca
ttggaagcgccgctgaacgccttgttgcccgcctggaccatcggcagccgtaccggcgat
acctccggcagcgaacgcgcgcgccagctgcgcagcttgccgagcgcattgatcaccacc
cccgaaagcctgtcgctgctgctgagccaggatgacgccgccgcgcggttcggcaagctt
gacgccgtcatcgtcgacgaatggcatgagctcatgggcagcaagcgcggcgtgcagacg
caactggcgctggcgcgtctgcgccgctggcggccgcagctgatggtgtggggcttgtca
gccacactgggcaacctgcagcagtcgaaggacgccctgctcggagaagggcgcggcgtg
ctggtgcaaggcaagacgcgcaagaagatcgtggtcgatacgctgattccggcgcatccc
tcgcgtttcgcctgggccggccatctcggcctgcagatgctgccggcggtcgcggcggag
atcgacggccacgccagcacgctggtcttcaccaacacgcgctcgcaggccgagttgtgg
taccagaatctgctggcggcgcggcccgactgggccgggctgatcgcgctgcatcacggc
tcgctggaccgcgaggtgcgcgactgggtcgagctggcgatcaagaacggccagctcaaa
gcggtggtctgcacttccagcctcgacctcggcgtcgacttcgcgccggtcgagcgcgtg
ctgcagattggcagtgcacgcggcgtcgcgcgcctgctgcaacgcgccggccgcagtggt
cactcgcccggacgcgtgtcgcgcgtaacgctggtgccgaccaacacgctggaattgctg
gaagccgccggcgcgcgtcacgccgtcgccgccggccaggtcgagcaacgtccggtgccg
gatacgccgctcgatgtgctggtccagcatctggtgacgattgcgctgggcggcggcttt
cgttcgcaggaattgttcgacgaagtgcggaccgcctattcctaccgcgcgctgcgtccc
gaccagtggcaatgggcgctggatttcgtcgcgcgcggcggccagagcctgaccgcctat
ccggaatatcagcgggtggcgcccgatgccgacggcgtctatcgcgtgccggatgcggct
attgcacgccgccatcgcatgagcatcggcaccatcgtgtccgacgccagcatgcaagtg
caatacttgcggggcgcgcgtatcggcaccatcgaagaaggcttcatcgcgcgtctgcgt
gcgggtgaccgtttcctgttcggcggtcgcatgctggagttcgtgcgggtgcatgaaatg
accgcctatgtgcgtcgcgccaccagcggttccggcgccgtcccgcgttggcagggcggg
cgcctgccgctgtcgtcgacgctggcccatgccgtgctcgattgcctggaagaagccgcg
cacgacgcgtaccgcggtcccgaaatgcaggcgatgcagcctttgctggccttgcagcag
caatggtcggcgctgcccactgcgcgcaaactggtggtcgaacatctgcacagccgggaa
ggccatcatctgtttttctatccgttcgccgggagactggtgcatgtcgggttggcggca
ttgatttcctatcggctggcgcagcggcgggctgcaacgttttctatcgcggtcaacgac
tacggtttcgaattgctgagcgcgacgccgatcgacgtcaccgatctctttccggcggcg
gacatggacggcgccttgttctcttcggcgcatttgctggaagacgtcatcgccagtctc
aacgccaccgaactgacccaacgccgcttccgtgaaatcgcgcgtatttccgggctggtg
ttccaagggtttcccggacagccgaagagcacgcgccagctgcaggcgtcggccagcctg
ttctttgaggtgttccgcaaacacgacgccggcaacctgctgctgacgcaggcgcagacc
gaagtgctggagcaggaactggaattgcagcgcctgcgcgagacgctggaggaactgcgc
ggccgcagcctgcaggtatgcaacatcgcgcgcgcgacgccgttcggctttccgctgatg
gtggagcgcttccgtgaaaagctgtcgactgaaaaactcagcgatcgcgtggcgcgtatg
ctgcaggaactggaaaaggcggcggcgcgatga

DBGET integrated database retrieval system