Herbaspirillum hiltneri: F506_20985
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Entry
F506_20985 CDS
T04039
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht03030
DNA replication
hht03430
Mismatch repair
hht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F506_20985
03430 Mismatch repair
F506_20985
03440 Homologous recombination
F506_20985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hht03032
]
F506_20985
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_20985
Enzymes [BR:
hht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F506_20985
DNA replication proteins [BR:
hht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F506_20985
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F506_20985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_18
AAA_14
AAA_30
AAA_2
nSTAND3
TsaE
AAA_19
PIF1
AAA_assoc_2
Glyco_tranf_2_5
Rad17
AAA_28
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AKZ64796
UniProt:
A0ABM5V5I3
LinkDB
All DBs
Position
complement(4661254..4663275)
Genome browser
AA seq
673 aa
AA seq
DB search
MSYQVLARKYRPRSFETLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
SLNCQGPDGNGGITAQPCGVCDACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIISHLDNILGQENIEFEAPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE
AVQGMLGALDQSYLIRVLDALAVQDGAGLLAVADEMATRSLSYNAALQDLATLLHQIALA
QTVPAALAEDLPQREDIVRLASQFSAEEAQLFYQIVVHGRNELGLAPDEYAGFSMTLLRM
LAFRPVAANAAAAGSTPAPAVRPQAAAPSRPNPAVAPLSAAPQVATASTPVARPAAAAPA
ASAGPANSARAAALEAARAASGKSSPRPAVQAPAPAPAPAVAASAPAPSAVPAALDERAP
PPWDEEPAAAAAQKKTEQYSAGNAVANAAPSAPIVIAADEAIVVAAPASTVTPAMAAQTA
KVAAELGWDGNWPQLAADLSLRGMVAQMAQQSELVRCEQSGNSVIFHLRIPVETLRASGN
IEKLTAVLGERFNRSVRVETEIGAVALTANARAQADRAERQREAEQTMHNDPFVQVMMRE
FDASIVPGSIRPL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcctaccaagtcctcgcccgtaaataccgcccccgcagcttcgaaacgctggtcggg
caggagcacgtcgtgcgggcgctgacgcatgcgctggaacagcaacggctgcaccacgcc
tacctgttcaccggcacccgcggcgtcggcaagaccacgctgtcgcgcatcctggccaaa
tcgctgaattgccagggtccggacggcaatggcggcatcacggcgcaaccgtgcggcgtt
tgcgacgcctgcgtggcgatcgacgccggccgttttgtcgattacatcgaaatggatgcc
gcctccaatcgcggtgtcgacgagatggcacaattgctggagcaggcggtctatgcgccg
tccaatgcgcgcttcaaggtctacatgatcgacgaagtccacatgctcaccaaccacgcc
ttcaactccatgctgaagacgctggaggagccgccggaacacgtcaagttcatcctggcg
accaccgacccgcaaaagattcccgtgaccgtgctgtcgcgctgcctgcagttcaatctg
aagcagatgccgccgggtcatatcatcagccacctggacaatatcctcgggcaggaaaac
attgaattcgaagcaccggcgctgcgcctgctggcgcaaggcgcgcacggctcgatgcgc
gatgcactgtcgctgaccgaccaggcgatcgcctacgccgccggcaaggtcacgctggaa
gcggtgcagggcatgctcggcgcgctcgaccagtcctatctgatccgcgtgctcgatgca
ctggccgtacaagacggcgccggcctgctcgccgtggccgatgaaatggccacgcgcagc
ctgtcgtacaacgccgcgttgcaagacctagcgacgctgctgcatcagatcgccctggcg
cagaccgttcccgccgccttggccgaagatttgccgcagcgcgaagacatcgtgcgtctg
gcctcgcagttcagcgccgaagaagcgcaattgttctatcagatcgtcgtgcacggccgc
aacgaactcggcctggcgccggatgaatatgccggcttcagcatgaccctgctgcgcatg
ctggcgttccgtccggtggctgctaatgcggcagctgcgggtagcacgccggcgccggcg
gtgcgtcctcaggccgctgcaccgtcgcgtccgaatcccgcagtcgcgcctttgagcgcc
gcaccgcaagttgccacggcaagtacgccggttgcgcgtcctgccgcagcggcaccggcc
gcgtctgccgggccagccaattccgcacgcgccgctgcgctggaagctgcccgtgccgcc
tccggcaagagttcgccgcgtcccgcggtacaggctccggcccctgcgcctgctcctgca
gtcgccgcatcggctcctgctccgtctgcggttccggcggcactggacgaacgggcgccg
ccaccgtgggatgaagagccggcagcagccgctgctcaaaaaaaaactgaacaatattca
gcaggcaacgccgtagccaatgccgccccgtctgcgccgatcgtgatcgccgcagacgaa
gccatcgtcgttgccgcgccggccagcaccgttacgccggcgatggccgcgcagaccgcc
aaggtcgccgccgaactcggctgggacggcaactggccgcaactggccgccgatctgtcg
ctgcgcggcatggtggcgcagatggcgcagcaaagtgaactggtgcgctgcgaacaaagc
ggcaacagcgtgattttccatttgcggatcccggtggaaaccctgcgcgcctcgggcaac
atcgaaaagctgaccgccgttctcggcgagcgattcaaccggagcgtgcgcgtcgagacc
gagatcggcgccgtggcgctcacggccaatgcccgggcgcaagccgaccgcgccgagcgg
caacgcgaagccgagcagaccatgcacaatgatccgttcgtgcaggtcatgatgcgggaa
ttcgacgcatccatcgtgccgggatcgatccggccgttgtga
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