Herbaspirillum hiltneri: F506_21065
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Entry
F506_21065 CDS
T04039
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hht03032
]
F506_21065
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_21065
Enzymes [BR:
hht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F506_21065
DNA replication proteins [BR:
hht03032
]
Prokaryotic type
DNA Topoisomerases
F506_21065
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F506_21065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
BLYB
Motif
Other DBs
NCBI-ProteinID:
AKZ64810
LinkDB
All DBs
Position
complement(4679677..4682325)
Genome browser
AA seq
882 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN
RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYMLVDGQGNFGSIDGDGAAAM
RYTECRLDKIANELLADIEKETVDFDPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
NIPPHNITEVINGALHVLANADCTIDELIELIPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGREGRTAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDRQPKLLNLKQMLECFLSHRRE
VVTRRTIFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKSELMARAWDSSMV
REMLARTGAENSSGIEAFRPENLPAHYGIQTDGLYKLSDDQAQEILQMRLQRLTGLEQDK
IVNEYKEVMEQIADLLDILSKPARVTAIITDELTAAKNDFGIGVKDERRSTIEHNATDLG
TEDLITPQDLVVTLSHSGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY
ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVVLPLSGENRVFPEDRY
VFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVR
FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH
GRGTKGMIAIQTSERNGKVVAATLVEASDEIMLITTGGVLIRTRVAEIREMGRATQGVTL
IAVEDGTKLSGLQRVVESDAEEDKAEDDVEGTAAPEGDAPAE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagaaaccatccccatttcccttgaagaagagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtcggacgtgctcttccggacgtgcgtgacggc
ctcaagccggtacaccgccgcgtgctgtttgcgatgcatgaaatgaacaacgtctggaat
cgcccgttcgtgaaatgcgcgcgcgtggtcggtgaagtcatgggtaaataccacccgcac
ggcgacgcgtccatttacgacacgctggtgcgtatggcgcaggatttttcgctgcgttac
atgctggtggacggacaaggcaatttcggctcgatcgacggcgacggcgccgcggcgatg
cgttataccgagtgccggctggacaagatcgccaacgaattgctggccgatatcgagaag
gaaaccgtcgatttcgatcccaactacgacggcaaggaaaaagaaccgtcggtgctgccg
actcgcatccccaacctgctgatcaacggttcgtccggcatcgcggtgggcatggctacc
aacattcctccgcataacatcaccgaagtcatcaacggcgcgctgcatgtgctggccaac
gcggattgcaccatcgacgagctgatcgagctgattccggcgccggacttcccgacgggc
ggcatcatttacggcgtgtccggcgtacgcgatggttatcgcaccggccgcggccgcgtc
gtgatgcgcgccaagacccacttcgaggaattcggtcgcgaaggccgtacggcgatcatc
gtcgacgagctgccgtaccaggtcaacaagaaggccttgctcgagcgtatcgccgagctg
gtgcgcgacaagaaactggaaggcatctccgacctgcgcgacgaatccgacaagtcgggc
atgcgcgtggtgatcgaactcaagcgcggcgaagtgcctgaagtggtgctcaacaatctg
tacaagcagacccagctgcaggacaccttcggcatgaacatggtggcgctggtcgaccgc
cagccgaagctgctgaacctgaagcagatgctggaatgcttcctgtcgcatcgccgcgag
gtggtcacacgccgcacgatcttcgaactgcgcaaggcgcgcgaacgcggccacgtgctg
gaaggcctggcggttgcgctggccaacatcgacgacttcatcgccatcatccgcgcggcg
ccgacgccgccgatcgcgaaatcggaactgatggcacgcgcctgggattcgtccatggtg
cgcgaaatgctggcccgcaccggtgcggaaaacagcagcggcatcgaggccttccgtccg
gaaaacctgccggcgcattacggcattcagaccgacggtctgtataagctgtccgacgac
caggcgcaggaaatcctgcaaatgcgtctgcaacgcctgaccggtctggaacaagacaag
atcgtcaatgagtacaaggaagtgatggaacaaatcgccgacctgctggacattctgtcc
aagccggcgcgcgtgaccgccatcatcaccgacgaactgacggccgcgaagaacgacttc
ggcatcggcgtcaaggacgagcgccgctcgaccatcgaacacaatgccaccgatctcggc
actgaagacctgatcacgccgcaagacctggtcgtgacgctgtcgcactcgggctacatg
aagtcgcagccggtgtccgaataccgtgcacaaaaacgcggcggccgcggcaagcaagcc
atggcgaccaaggacgacgactggatcgaccagctgttcatcgccaacacgcacgattac
atcctgtgcttctccaaccgcggccgtctgtactggctcaaggtgtgggaagtgccgcag
ggttcgcgcaattcgcgcggcaagcctatcgtcaacatgttcccgctgcaggatggcgaa
aagattaccgtggtcctgccgctgtcgggcgagaaccgcgtcttccccgaagaccgttac
gtcttcatgtcgaccagcctcggcaccgtcaagaagacgccgttgtccgacttcagcaat
ccgcgcaaggccggcatcatcgcggtcgatctcgatgagggcgacttcctgatcggcgct
gcgttgactgacggccagcacgacgtcatgctgttctccgattccggcaaggcagtgcgc
ttcgacgagaacgacgtgcgtccgatgggccgcacggcacgtggcgtgcgcggcatgaac
ctggaagaaggtcagcaagtcatcgcgctgctggttgccgaaaacgaacagcagtcggtc
ctgacggcgaccgagaacggcttcggcaaacgtacgccgatcaccgagtacacccgccac
ggccgcggcaccaagggcatgatcgcgatccagaccagcgaacgcaacggcaaggtggtt
gcggcaaccctggtcgaagccagcgatgaaatcatgctgatcaccaccggcggcgtgctg
atccgcacccgtgtcgcggaaattcgcgaaatgggccgggcaacgcaaggcgtaacgctg
atcgccgtggaagacggcaccaagctgagcggcctgcagcgagtggttgagtccgatgcc
gaagaagacaaggccgaagacgatgtcgaaggtacggctgctcccgaaggcgacgcgcct
gctgaataa
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