Halomonas huangheensis: AR456_02650
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Entry
AR456_02650 CDS
T04119
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AR456_02650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhu03400
]
AR456_02650
Enzymes [BR:
hhu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AR456_02650
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AR456_02650
DNA repair and recombination proteins [BR:
hhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AR456_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7351
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALM51315
UniProt:
W1N2N1
LinkDB
All DBs
Position
560636..561493
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVETTRRGIAPHVEGREIREVIVRESRMRTPVPTDFDDRLIGARFGSLQRRAKYL
LLPLHDGEDASHERGTLIWHLGMSGSLRIVRLGEMPRKHDHIDVVLDDGVILRYHDPRRF
GFVDWLRGSVGEENLVSEDPRLSRLGPEPLSDAFDGARLFDRSRGRRIAVKPFLMDNAVV
VGVGNIYAAEALFLAGIDPRTAAGRISRERYDRLAAACREVLAAAITQGGTTLRDFVSGT
GEPGYFAQRLNVYGRHGEPCRRCGAELRLVTLGQRASVFCPDCQH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggttgaaacgacgcgacgtggtattgcgcctcatgtcgagggg
cgtgagattcgcgaggttatcgtgcgggagtcgcgtatgcgcactccggtgccgaccgac
ttcgatgatcgcttgatcggtgctcgcttcggtagtctgcagcggcgtgccaagtatcta
ctgctgccgttgcatgatggcgaggatgccagtcatgagcgcggtacgctgatctggcac
ctgggcatgtccggcagtctgcgtatcgtgcgccttggcgagatgcccagaaagcacgat
catattgatgtggtgctcgatgatggcgtgattctgcgttatcacgatccgcggcgattc
ggctttgtcgactggttgcgtggttctgtcggtgaagaaaacctggtcagcgaagatcca
cgactgtcgcggctcggtcctgagccgttatcggatgccttcgatggtgctcgcctgttt
gatcgctcacgtgggcggcgtattgcagtgaagcccttcctgatggataacgctgtggtg
gtcggagtgggtaatatctacgctgccgaggcgctgttccttgctggtatcgatccgcgt
accgctgccgggcgtatttctcgagagcgctatgatcgccttgccgcggcctgccgtgaa
gtgctggctgcagcgattacccagggcggaacaacactgcgtgattttgtcagcggtacg
ggtgaaccaggctacttcgctcagcgtctcaatgtctacggtcggcatggagagccctgt
cgacgctgtggtgccgaattgcgtctggtgacgctggggcagagggccagtgtattctgt
cctgactgtcagcactga
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