Halomonas huangheensis: AR456_02855
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Entry
AR456_02855 CDS
T04119
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03030
DNA replication
hhu03430
Mismatch repair
hhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AR456_02855
03430 Mismatch repair
AR456_02855
03440 Homologous recombination
AR456_02855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhu03032
]
AR456_02855
03400 DNA repair and recombination proteins [BR:
hhu03400
]
AR456_02855
Enzymes [BR:
hhu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AR456_02855
DNA replication proteins [BR:
hhu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AR456_02855
DNA repair and recombination proteins [BR:
hhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AR456_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ALM51351
UniProt:
W1N4A5
LinkDB
All DBs
Position
605950..609456
Genome browser
AA seq
1168 aa
AA seq
DB search
MSVPFVHLRVHSEFSLVDGLVRLKPYIKAGEQQGAPALALTDESNLFGLVKFYNGAQGAG
IKPIIGSDLWLSNIHDPEHPYRLTLLAMNDVGYRNLTELISRGWMHGQRQGRAILDKAWV
MEQSEGLIALSGGRDGEVGRYLLSDHQHEAHQVLEEWTSAFPGRFYLELTRTGRPLEEDC
VHASVALALETDTPVVATNDVRFLAREDFWAHETRVSIGEGRALDDPRRERRYTEEQYFK
SPTEMAELFADIPEAIENTVMIAARCSVDVRLGEIFLPEYGIPDGMTQDEFFRKISHDGL
TERLDALYPLETHPRGTEEWAETEKRYRERLDFELNIILQMGFPGYFLIVMDFIQWAKDN
DVPVGPGRGSGAGSLVAYAQKITDLDPIQYDLLFERFLNPERVSMPDFDVDFCMEKRDRV
IDYVAERYGRNAVSQIVTFGTMAAKAVVRDVARAQGKPYSLGDKLSKLIPFEVGMTLGKA
IEQEPQLKDFIDVDEDAQEIWEMALKLEGVTRGTGKHAGGVVIAPTKLTDFAPLLCDEEG
NGLVVQFDKNDIEDAGLVKFDFLGLRTLTIIDWALEMVDKVRAVNDQGPLDIDTIPLDDG
KTFEMLKKAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINR
KHGRAEISYPHPDYQHELLKPVLNPTYGIILYQEQVMQIAQVMAGYSLGQADLLRRAMGK
KKPEEMAKQRVGFMEGCEANGISADLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDDQGRVVYG
LGAIRGVGEGPIGAIVEARSADGPFQDLFDFCRRVDPKRMNKRTLEALIRSGALDNLGPN
RAVLAAALDDALRAAAQNQQNQNAGMMDLFGEAFVADEEESSDPYADYSRAREWTDRERL
AGEKDTLGLYLTGHPIDEYETELARFVSTRIADLKPSREPQRVAGLVVGMRTMKSKRGDT
MAFLTLDDRTGRIEASLFGELFDSVRAQLDNAEVLIIEGEVSSDDYSGGLRLRGKDVTPM
VQARTRFGQAVEVSINAGNANGRLIDSLHQSLAPHRSEEGLPVRLRYRSHEACGWLEFDE
QWKVMPSDELLIALREVEGQDGVRLKYR
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcccctttgttcatctgcgcgttcacagtgaattttccctggtcgatgggctg
gtgcgcctcaagccctacatcaaggcgggggaacagcagggggcgccggcactggcactg
accgatgagagcaacctgttcggcctcgtcaagttctacaacggtgcccagggcgccggc
atcaagccgatcatcggctctgacctgtggctgtccaatatccacgacccggagcacccc
taccgtctgacactgctggcgatgaacgatgtcggctatcgcaacctgaccgagctgatc
tcgcgaggctggatgcacggtcagcgtcaggggcgggcgattctcgacaaggcctgggtc
atggagcagagcgaaggtttgatcgcgctgtccgggggtcgtgatggcgaggtcggtcgt
tacctgctgagtgatcatcagcatgaggcccaccaggtgctggaggagtggacatcggcc
ttccccggccgcttctacctcgagctgacccgcaccggccgccctctggaagaggactgt
gtgcatgcctcggtggcgctggcactggaaaccgatacgccggtggtggcgaccaatgac
gtgcgctttctcgcgcgagaggatttctgggctcacgaaacgcgggtgtcgattggtgag
gggcgtgcactggatgacccgcgccgtgaacgccgctacaccgaggagcagtatttcaag
agcccgacggaaatggccgagttgttcgccgacattcccgaggccatcgagaacacggtg
atgatcgctgcacgctgcagcgttgacgtgcggcttggggaaatattcctgcccgagtac
ggcattcccgacggcatgacccaggacgagttctttcgcaagatttcccatgatggtcta
accgagcgtctggatgcgctgtatccgctggagacacatccgcgcggcaccgaggaatgg
gctgagaccgagaaacgctaccgtgagcgtctcgatttcgagctcaacatcattctgcag
atggggttccccggttacttcctgatcgtgatggatttcatccagtgggccaaggacaac
gatgtcccggtggggccgggtcgtggctccggtgccggctcgctggtcgcctacgcgcag
aagatcaccgatctcgacccgatccagtatgacctgctgttcgagcgcttcctcaacccg
gaacgtgtctcgatgcccgactttgacgtcgacttctgcatggagaagcgtgaccgggtc
atcgactatgtggcggagcgctacgggcggaatgcggtatcgcagatcgtcaccttcggc
accatggccgccaaggcggtggttcgtgatgtcgctcgtgctcagggcaaaccctattcg
ctgggtgacaaattgtccaagctgatcccctttgaagtgggtatgacgctgggcaaggcc
attgagcaggagcctcagctcaaggatttcatcgacgtcgatgaagatgcccaggaaatc
tgggagatggcgctcaagctcgagggggtcactcgcggaaccggcaaacacgccggtggt
gtggtgatcgcaccgaccaaactgaccgacttcgcaccattgctgtgcgacgaggagggc
aatggtctggtggtgcagttcgacaagaatgacatcgaggatgcgggtctggtcaagttc
gacttcctcggtctacgaacgttgaccatcatcgactgggcgctggagatggtcgacaag
gtgcgggccgtcaatgaccagggtccgctggatatcgataccatcccgctggatgacggc
aagaccttcgaaatgctcaagaaggccgagacgaccgcggtcttccagcttgaatcgcgc
ggcatgaaggaactgatcaagcgcctgttgcccgactcgttggaggacatgatcgccctg
gtggccttgttccgcccgggacctctccagtccggcatggtcgatgacttcatcaaccgt
aagcatggccgggccgagatttcctatccacacccggattatcagcatgaactgctcaaa
ccggtactgaaccccacctacggcatcatcctctatcaagagcaggtgatgcagattgcc
caggtgatggctggctactctctgggtcaggctgacctgttgcgccgcgcaatgggcaag
aagaagccggaagagatggccaagcagcgcgtagggttcatggagggctgcgaggccaac
ggcatcagtgctgacctggcaggtaatatcttcgacctggtggagaagtttgccggttac
ggcttcaacaagtcgcactcggcagcctatgcactggtgtcctaccagaccgcctggttg
aaggcgcactacccgggaccgttcatggcggcggtgatgtccaccgaaatggacaacctc
gacaaggtggtgccgctgattgaggagtgtcgcaacctcaagctcaccgtgacgccgcct
gacgtcaatgttggtggttacaagtttaccgtcgatgaccaagggcgagtggtctacggc
ctcggtgccattcgtggggtcggtgaaggcccgatcggggcaattgtcgaggcgcgcagt
gcggatggtcccttccaggatctgttcgatttctgccgccgtgtggatccaaaacgcatg
aacaagcgtaccctggaggcgctgattcgctctggtgcattggataaccttggcccgaat
cgtgccgtactggccgcagcgctggacgacgctctgcgcgctgctgcacagaaccaacag
aatcagaatgccgggatgatggatctgttcggcgaggcttttgtcgccgacgaggaggag
tcttccgatccttacgccgactacagccgcgctcgtgaatggaccgatcgtgagcgactc
gcgggcgagaaagacactctgggactgtacctgaccgggcatcctattgatgagtacgag
acagaattggcacgctttgtctcgacgcgtattgccgacctcaaaccttcacgggaaccc
cagcgggtggccggtctggttgttggtatgcgcaccatgaaatccaaacgcggcgatacc
atggccttcctgaccctcgatgatcgtaccgggcggatcgaggcatcgctgtttggcgaa
ctgttcgatagcgtgcgtgctcagttggataacgctgaggtgctgatcatcgaaggcgaa
gtgtccagcgatgattactcaggcggtctgcgcttgcgtggcaaggacgtcacgccgatg
gtgcaggcacgtacacgcttcggtcaggcggtggaggtgtcgatcaatgccggcaacgcc
aatggacgcctgatcgacagcctgcatcagagtctggcgccccatcgtagtgaggagggc
ttgcctgtccgactgcgttaccgcagccatgaagcctgtggttggcttgaattcgatgag
cagtggaaagtcatgcccagcgacgagctgttgatcgcgctgcgtgaagtggaaggtcag
gacggggtgcgactgaagtatcgttga
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