Halomonas huangheensis: AR456_02910
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Entry
AR456_02910 CDS
T04119
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hhu
Halomonas huangheensis
Pathway
hhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR456_02910 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhu03021
]
AR456_02910 (rho)
03019 Messenger RNA biogenesis [BR:
hhu03019
]
AR456_02910 (rho)
Transcription machinery [BR:
hhu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AR456_02910 (rho)
Messenger RNA biogenesis [BR:
hhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AR456_02910 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
NACHT
AAA
Fungal_virus_P2_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALM51361
UniProt:
W1N3S0
LinkDB
All DBs
Position
624424..625683
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPVPELLNIAREMGIDNLARSRKQDIIFAILKKHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRKGDTISGKIRPPKEGERYFALLKVSEIN
LDRPENAKHKILFENLTPLFPDERLRMEIGNGSTEDLTARIIDLTAPIGKGQRGLLVSPP
KAGKTLMLQNIATSITRNNPECQLIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMEAHLDRRLAERRIYPALNI
RRSGTRREDLLASEEEMQRMWILRKLLNPMDDTAATEFLVDRLKDTKTNIEFFEAMKRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgaactcaagcaaaagcctgtgccggagcttctcaacatcgctcgcgag
atgggaatcgataatctggcacggtcccgcaagcaagacatcatcttcgcgattctcaag
aaacatgccaaaagtggcgaggatatcttcggcgatggcgtactggaaattctccaggac
ggtttcggcttcctgcgtagcgcagacagctcctacctggccggccctgacgatatctac
gtttctccttctcagattcggcgctttaaccttcgcaagggcgacaccatctccggcaag
attcgcccgcccaaggaaggtgaacgctacttcgcactgctcaaggtcagcgagatcaac
ctcgaccgacccgagaatgccaagcacaagattctgttcgagaaccttacgccgctgttc
cccgatgaacgtctgcgcatggagatcggcaacggctccaccgaggatctcactgctcgt
atcatcgacctgacggcaccgatcggcaaaggccaacgtggcctgctcgtatctccgccc
aaggccggtaagacgttgatgttgcagaacatcgcaacctccatcacgcgcaacaacccc
gagtgccagttgatcgttctgctgatcgacgagcgccccgaggaagtgaccgagatgtcg
cgtaccgtgcgtggtgaggtagtggcttcgaccttcgatgagccgccggcacgccatgtg
caggtcgccgagatggtcatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtcattctcctcgactcgatcactcgtctggcgcgtgcctacaacaccgtggtgccgtcc
tccggcaaggtgttgactggtggtgtcgatgctcatgcgttggagaagcccaagcgcttc
ttcggtgccgcacgtaacatcgaggaaggcggcagcctgaccattatcgccacggcgctg
gtcgataccggctccaagatggacgaggtgatcttcgaggaattcaagggtaccggtaac
atggaagcccacctcgatcgccgtcttgccgagcgccgcatctatccggcactcaacatt
cgccgttccggtactcgtcgcgaggacttgctggcgtccgaggaagagatgcagcgcatg
tggattctgcgcaagctgctcaacccgatggacgacaccgccgcgaccgagttcctggtg
gatcgcctgaaggatacgaagaccaatatcgagttcttcgaggctatgaagcgtcgatag
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