Halomonas huangheensis: AR456_04060
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Entry
AR456_04060 CDS
T04119
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AR456_04060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhu03400
]
AR456_04060
Enzymes [BR:
hhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AR456_04060
DNA repair and recombination proteins [BR:
hhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AR456_04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
AAA_16
UvrD-helicase
SLFN-g3_helicase
NTPase_1
AAA_28
nSTAND3
T2SSE
UvrD_C
AAA_25
AAA
TrwB_AAD_bind
AAA_17
NPHP3_N
SRP54
CbiA
Motif
Other DBs
NCBI-ProteinID:
ALM51557
UniProt:
W1N4C8
LinkDB
All DBs
Position
complement(889461..891530)
Genome browser
AA seq
689 aa
AA seq
DB search
MSQRLSSVDLQRVLDDREALMTLLTRWVERGWLRAIDRAFTEFLSRECPDASALLLLAAA
LASHQLGRGHLCLALGQTLAAPDLALSLPPEGDDREDPPPLPSMVLDGLSGEHWSAALHH
PELVQSGDGESPLVAVGNGADTRLYLRRYWQHEQSIRHYIGIRLQAEPLPAASLRPIIDS
LFPAGADLDWQRLACALAARSAFAVITGGPGTGKTTTVVKLLALLQSQALDTSGRALRIR
LAAPTGKAAARLNASIAAQLERLDLNSLDQDPQTLREAIPSQVVTLHRLLGSRPDTRRLR
HNANNPLPLDVLVVDEASMVDVELMAAMLEALPSEARLVLLGDKDQLASVEAGSVLGDLC
QRAEGGHYREATRRWLAEASGQDLPDCCIDDTGNALDQAVTMLRVSHRFDANSGIGQLAS
AINSGDPDATRKVLGHGYGDLSSQRLDADDQRLERLAVEGLASAFPTSGARGYSHYLGVM
NDQRPAHHAEDEQWDSWARAVLDAHGSFQVLCALRRGRWGIEGLNQRITRALASSGWLPQ
WLADIDGDRWFAGRPVLVTRNDYGLGLMNGDIGITLARPHPENPHQTTLRVAFAAGDGSD
RIRWVLPARLRDVETVFAMTVHKSQGSEFDHTALILPEASSPILTRELIYTGITRARRWL
SLVETGPARVLDQAVMQRVMRISGLQTPQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacgcctgtcctccgtcgatctccagagagtgcttgacgaccgcgaagcgttg
atgacgctactgacgcgctgggtcgagcgcggctggctacgcgccatcgaccgcgccttc
accgagttcctcagccgtgaatgtccggatgcatctgcattgttgttgctggccgccgcc
ctcgccagccatcagctcggtcgaggccatctttgcctggcattggggcagaccctggcc
gcacccgatctcgcactgtctctccccccagaaggtgatgatcgagaagacccaccgccg
ttacccagcatggtcctcgacggtttgagtggcgagcactggtccgcggcactccatcac
cccgaactggtgcagagtggcgacggtgaatcgccattggtagcggtaggcaacggtgcc
gatacacgactctatctgcgccgctactggcagcatgagcaaagcattcgccattacatc
ggcattcgcctgcaggccgagccactaccggcagcctctttgcgtccaataatcgacagc
ctgttccccgccggcgcagacctcgattggcaacgcctggcctgcgcgctggccgccagg
tccgcgtttgcggtgatcaccggcggacctggcaccggcaagaccaccaccgtggtcaaa
ctattggcactgctgcagagtcaagccctggacacctccggccgtgcattgcgaattcgc
ctcgccgctcccaccggcaaggctgcagcgcgcctcaatgcgtcgattgccgcgcaactt
gagcgcctcgacctcaacagcctcgaccaggacccgcaaacattgcgcgaggccatcccc
agccaggtcgttaccctgcatcgtttattgggctctcggccagatacacgacgcctgcgc
cacaacgccaataatccgttgccgcttgatgtactggtggtcgatgaggcgtcgatggtt
gatgtcgagctgatggcagcaatgctggaggcgctaccgagcgaagcacgcctggtgctg
ttgggcgacaaggatcagttggcctcggtggaagcaggatcggtactcggcgatctatgc
cagcgagccgagggtggtcattaccgggaagccacgcgtcgctggctggccgaggccagt
gggcaggacctgccggattgctgcatcgatgataccggtaacgcgctcgaccaggcggtg
acaatgttgcgtgtcagccaccgcttcgacgccaacagtggcatcggccaactggccagt
gcgatcaattccggcgacccggacgcaacccgcaaggtgcttggtcatggctatggagat
ctctccagccagcgtctggatgccgacgaccaacgccttgagcgtctcgcggtagagggc
ctggcaagcgccttccccacaagcggcgcccgtggctacagccactatctgggagtcatg
aatgaccaacgccccgctcaccacgccgaagatgaacagtgggatagctgggcgagagcc
gttcttgacgctcacggcagctttcaggtgctgtgtgcactgcgccgtggccgttggggg
atcgagggtttgaaccagcgtatcacccgcgccctggcaagcagcggttggctgcctcag
tggctcgccgacatcgacggagatcgctggtttgccggcagaccggtgctggtcacgcgc
aatgactacggcctcggcctgatgaacggtgatatcggtatcacccttgcccgcccacat
cccgagaacccacaccagacgactctgcgagtcgcctttgctgctggcgatggtagtgat
cgtatccgttgggtactgcccgctcggctgcgcgatgtggaaacggtcttcgcgatgacc
gtccacaagtctcagggatcggagttcgatcataccgcgctgatcctgcccgaggcctcc
agccccattctgacccgcgaattgatctacaccggtattacccgcgccaggcgctggttg
agtctggtggagaccgggcccgctagagtcctggaccaggcagtgatgcagcgagtcatg
cggatcagcgggctacagacgccacagtaa
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