Halomonas huangheensis: AR456_04080
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Entry
AR456_04080 CDS
T04119
Name
(GenBank) transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AR456_04080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhu03000
]
AR456_04080
03400 DNA repair and recombination proteins [BR:
hhu03400
]
AR456_04080
Enzymes [BR:
hhu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AR456_04080
Transcription factors [BR:
hhu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AR456_04080
DNA repair and recombination proteins [BR:
hhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AR456_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
TMV_coat
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ALM51560
UniProt:
W1N528
LinkDB
All DBs
Position
complement(899626..901035)
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AA seq
469 aa
AA seq
DB search
MPITTPAMPPSLDPEHCRVARMARDARFDGRFFVAVVTTGIYCRPICPAPAPHERNVRYY
ASALEAASAGFRPCLRCRPDSAPGSPAWQGTDTTLRRALRLIDEGALSTGNMTQLADRLG
IGERHLRGLFQRRFGVSPKAYALHRQCLFAKQLLHQTRLPITQIAFASGFSSVRRFNDTF
RQRIGLAPRDIRRQHADNKDTQQSMQLTLSYRPPYAWQTYRNFMRKRAIAGLEWVEENAV
GRHFLWAGTSGHFTAHHQPQRHAFRVELALDDLRQLAPVVANIRRILDLDADCELIEQHL
ATNQTHLPLLNGLRLPGTWSPFEAMIRAVLGQQVSLIAARRLTQQLVNALGQPAPANGRH
FPGAEAIAGSDLTFLGMPGRRRQTLIDVARASLEGNHDFLNVSGIGPWTRDYARLRGDSN
PDVWLTGDAGLRRALKQWPDLDAEQAAPWRSYLLMQLWSLEDERPHETQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaccacgcctgccatgcccccgagcctcgatcccgagcattgccgtgtggcg
cgcatggcacgcgacgccaggttcgacggcagattcttcgtcgctgtggtgaccaccggc
atctactgccgtcccatctgtcctgcgccagcgccacatgagcggaatgtgcgttactac
gccagtgcgctggaagcggcctcggcaggctttcgcccctgtctgcgctgccgccccgac
agtgcgccaggctcccccgcctggcaaggcaccgacacgaccctgagacgagcactccgc
ctgattgacgaaggcgcgctgagcacgggcaacatgacacaacttgccgaccggctgggc
atcggagagcgtcacctacgtggcctgtttcagcgtcgcttcggcgtatcgcccaaggcc
tacgcgctgcaccgtcagtgcctgttcgccaaacagctgttgcaccagacgcgcctgccc
atcactcagatcgcctttgccagcggcttttccagcgtacgacgcttcaatgacaccttc
cggcaacgcattggtctcgcccccagagatattcggcgacaacatgccgataacaaggat
acccagcagtcgatgcaactgaccttgagctatcgtccgccctacgcctggcagacctac
cggaacttcatgcgcaaacgcgccatagcgggattggaatgggtcgaggaaaacgccgtt
ggccgacacttcctgtgggccgggaccagcggacacttcaccgcccatcaccagccacag
cggcacgcctttcgtgtcgaactggcactggatgatctgcgtcagctggcgccggtggtc
gccaatatccgccgcatactggatctggatgccgattgcgagctcatcgagcagcacctg
gctaccaaccaaactcacttgccgttactgaacggacttcgcctgccgggtacctggtct
ccctttgaagccatgattcgtgcggttctcggccaacaggtcagccttatcgctgcgcgg
cgtctcactcagcagttggtcaatgcgttggggcaaccagcgccggccaacggccgacac
ttccccggtgccgaggcgatagccggcagtgacctgacctttctcggtatgccgggtagg
cgtcgtcagaccttgatcgatgttgccagagccagcctggagggtaaccatgactttctg
aacgtcagcggcatcggcccctggacacgtgactatgctcgtctacgtggcgattccaac
cccgacgtatggctgacgggcgatgctggactgcgccgtgccctgaaacaatggcccgat
ctggatgccgaacaggccgccccatggcgcagctatcttctgatgcaactgtggagtctt
gaagatgaaagaccgcatgaaacgcaatga
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