Halomonas huangheensis: AR456_05795
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Entry
AR456_05795 CDS
T04119
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hhu
Halomonas huangheensis
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhu03016
]
AR456_05795
Enzymes [BR:
hhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AR456_05795
Transfer RNA biogenesis [BR:
hhu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AR456_05795
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ALM51846
LinkDB
All DBs
Position
complement(1274728..1276668)
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AA seq
646 aa
AA seq
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MLQNNALLTQLKQQIRDNTPRVTGVIKATEKGFGFLETDDGESYFVPPPAMKLVLHGDRV
EAILHEDGERKSVEPDTLIETGMQRFIARVQNRDGKLAVIPDHPSVRNVLKARIKRSLEG
QEFSEGDWVVARLVRHPLKPDDRAFFTQIDELVAKVDNPAVPWRVTLARHALEQDCPDAG
TDWPLHEEGLVREDLTAVPFFTIDGEKTRDMDDALSITTREQGGWTLSVAIADPTAYVEE
GHAADLEARTRAFTVYLPGQNVTMLPEQLADDLCSLHENQQRPVLACQLDVNADGSLGDY
RFFAATMCSHARLVYDRVSDWLEDKGDWAPDESVAAQLKALRDLTLARSGWRAEHALVFK
DRPDYAFDLDDAGNIKAILIEERRIANRMIEESMIVANACCADLLAQHVGHGIFNVHRAF
DDEKAEAAQNFLASQQIEVEREALTDLNRYKELKRALESRDDAWLDARLRKFQGFTSMSA
QPGPHFGLGLPAYATWTSPIRKYGDMVNHRLIKRVLKGEQAPPEASQQLTEQLTERRRLN
RMAERDVKDWLYVRYLSPAAGTGDVFDAEIIAINRGGMRVRLTANGATAFVPAPLMHSDR
DKVVVDDKEGRIQIEGEERYKLGDAVRVALTEAREETRSLVARPAD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctccagaacaacgccttgctgactcagctcaagcaacagattcgtgacaacacacct
cgtgtcacgggtgtcatcaaagccacggaaaagggctttggttttctcgaaaccgacgac
ggtgagtcgtacttcgttccccctcccgccatgaagctggtgcttcacggtgaccgggtc
gaggccatcctgcatgaggacggcgagcgcaagtcggtggaacccgatacgctcatcgaa
accggcatgcaacgcttcattgctcgcgtacagaaccgcgatggcaaattggcggtgatt
ccggatcacccttcggtgcgcaatgtcctcaaggcccgcatcaagcgcagcttggaaggc
caggaattcagcgaaggcgattgggtcgtggcacgcctggtgcgtcacccgctcaagccc
gatgaccgcgccttctttacccagatcgatgagcttgtggcgaaggtcgacaaccctgca
gtgccatggcgagtcactctggcccgccacgccctcgaacaggattgcccggatgccggc
accgactggcctctgcacgaggaaggcctggttcgtgaagatctgaccgcggtgcccttc
ttcaccatcgacggcgaaaaaacccgcgacatggacgatgccttgagcattaccactcgc
gagcaaggtggttggacgctgagcgtggccattgccgaccccactgcctatgtagaggaa
ggtcatgctgccgacctcgaggcccgtacccgtgccttcaccgtgtacctgccgggacag
aacgtcaccatgctgcccgagcagttggctgatgatctctgctcgctgcacgagaaccag
caacgtccagtgctggcctgccaattggatgtcaatgccgatggcagtctcggcgattac
cgcttcttcgccgccaccatgtgctctcacgcacgcctggtgtatgaccgggtatccgat
tggctggaagacaagggcgactgggcacccgatgagagcgtcgcggctcaactcaaggcg
ctgcgcgatctgactctggcacgcagtggctggcgtgcagaacacgctctggtgttcaag
gaccgtcccgactatgcctttgatctggatgatgccggcaacatcaaggccatcctcatc
gaggaacgacgcatcgccaatcgcatgatcgaagaatcgatgatcgtcgccaacgcctgc
tgcgccgacctgctggctcaacatgtcgggcacggcatcttcaatgtgcaccgcgccttt
gacgacgagaaagccgaggctgcacagaacttccttgccagccaacagatcgaggtcgag
cgcgaggcactcaccgacctgaaccgctacaaggagctcaaacgcgctctggaaagccgt
gatgacgcctggctggatgcgcgactgcgcaaattccagggcttcaccagcatgtcggct
cagccaggcccgcactttggcctggggctacccgcctacgccacctggacctccccgatt
cgcaagtacggtgacatggtcaaccatcgcttgatcaagcgagtcctcaagggcgagcaa
gcaccgcccgaggccagccagcaactcaccgagcagctcaccgagcgccgccgcctcaac
cgcatggccgagcgcgacgtcaaggactggctctacgtacgctacctatccccggccgcc
gggaccggcgatgtcttcgatgccgagatcatcgccatcaatcgtggcggcatgcgagta
cgcctgactgccaacggtgccaccgccttcgtcccggctccgctgatgcacagcgaccgt
gacaaggttgtcgtcgatgacaaggaaggacgtatccagatcgaaggtgaggaacgctac
aagctgggtgatgcagtgcgtgtcgccctgacagaagcacgtgaagaaactcgctcgctg
gtagcacgtccagcggactga
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