Halomonas huangheensis: AR456_07105
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Entry
AR456_07105 CDS
T04119
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hhu
Halomonas huangheensis
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhu03016
]
AR456_07105
Enzymes [BR:
hhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AR456_07105
Transfer RNA biogenesis [BR:
hhu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AR456_07105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ALM52077
UniProt:
W1N548
LinkDB
All DBs
Position
1580529..1581653
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AA seq
374 aa
AA seq
DB search
MPVSPDIRWIDNGDALDEACVALQDAPVLALDTEFFREKTFHPVPALIQICAGGPAYLID
PLAVECTDALRALLTNDALKLLHASSEDLEVFAHWAGVLPSPLVDTQVAQSLLGEDAAMG
YQRLVEHWVGETLPKEETRSNWLERPLSDSQLSYAALDVVYLLEVWQRQEPALVDLRRID
WVMQDCAEILEQSERSTASDGQWYLRHRQLWRLNPRQVDAYRLMTTWREGEARQRNLPRG
WVMQDKLLYAIAERMPENRYELAEVDGVKPTMIKRDGDSLLAMVKQAQHQDAANLLPAPL
SPALPPFKKRLKALKQVVNGEAQQLGIAPEVLMRRRDLEALVTADMRNEPLSLPEGWRGE
LLNTGLEDALKAFS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttcccctgatatccgttggatcgataatggcgacgcccttgatgaggcctgc
gtcgcactgcaagatgcgccggtactggcgttggacaccgagttctttcgcgagaagacc
tttcacccagtgcctgctctgatccagatctgtgcgggcggcccggcatacctgattgat
ccattggcggtggaatgcacggatgcgttacgtgcattgctgaccaatgatgctctcaag
ctgctgcacgccagtagtgaagacctggaggtctttgcccattgggctggagtactgcct
tctcccttggtggatacgcaagtggcccagagcctgcttggcgaggatgctgccatgggc
tatcagcgtctggtggagcactgggtgggcgagacgttgcccaaggaagagacgcgctcg
aactggctggagcgcccgctgtccgattcgcagttgagctatgcggcgctggatgtggtc
tatttgctggaggtttggcagcgccaggaacccgcactggttgacctgcggcggatcgat
tgggtcatgcaggactgtgccgagattctggagcagtccgagcgcagtaccgcaagcgat
ggccagtggtatctgcgtcatcgccagctatggcggctcaatccccgtcaggtcgatgcc
tatcgactgatgaccacctggcgtgaaggggaagcccgtcagcgcaatcttccgcgtggc
tgggtgatgcaggacaagcttctctatgccattgctgagcgtatgccggaaaatcgctat
gagttggctgaggtggacggtgtcaaaccgaccatgatcaagcgagatggtgattcgttg
ctcgctatggtcaagcaggcacagcaccaggatgcggccaacctactgcctgcgccactc
tcgccggcattgccgccgttcaagaagcgcctcaaggcgctcaagcaggtcgtcaatggt
gaggcacaacaactcggtattgctcccgaagtactgatgcgccgccgtgacctcgaagct
ctggtgacagctgatatgcgtaatgaaccgctgtcactgccggagggctggcgaggtgag
ttactgaataccggactcgaagatgcactgaaggccttttcatga
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