Halomonas huangheensis: AR456_07150
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Entry
AR456_07150 CDS
T04119
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
hhu
Halomonas huangheensis
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhu03019
]
AR456_07150
Enzymes [BR:
hhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AR456_07150
Messenger RNA biogenesis [BR:
hhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AR456_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
AAA_25
NACHT
FtsK_SpoIIIE
SRP54
Motif
Other DBs
NCBI-ProteinID:
ALM54577
LinkDB
All DBs
Position
1592641..1596648
Genome browser
AA seq
1335 aa
AA seq
DB search
MSTETSTPPQRLDAETQLKHFEAALDDLMLRDRPGLAKRLAGLRRRVREGKPIDRALAEV
ASQVQRSQQLLAARRGRSVTLEYPEALPVAARRDDILAALAEHQVVVVAGETGSGKTTQL
PKLCLELGLGRRGLIGHTQPRRLAARSVASRLAEEMQVSLGDQVGYQVRFTDQTSDDTLV
KLMTDGILLAETRNDPDLLRYETLIIDEAHERSLNIDFLLGYLKRLLERRRDLKIIITSA
TIDVERFSQHFSLPGDDGKPKPAPVVEVSGRTFPVDVLYRPLVRDAEDEEDRTLSEGILH
AVEEIESIERERRWSAGPRDILVFLPGEREIRETADVLRRADLRHTEILPLYARLSNAEQ
NRVFASHSGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPVEAVSQAS
ANQRKGRCGRVAEGVCIRLYDEEDFLGRPEFTDPEIRRTNLASVILSMLSLKLGSIEAFP
FVDPPDSRFVTDGFRLLHELGAVDDQQRLTADGRRLARFPIDPRLARMLLAGDEQQCLRD
VLVVVSALAVQDPRDRPADKREAADQAHRRWRDPDSDFVAILNLWHGFEQAREELSGNRL
RRWCREHYLNYLRLREWHDTFRQLRQLLRDQDIQVPAPAVIDEEHEQAGELRRQASASMH
RALLTGLLSNLGTLTENRDYLGARNRKFMIHPSSGLSKKTPKWVMAMELIETSRLFARTV
ARIDPQWIEPLAGHLVKRNYSEPHWEMKRAQVVAFEQVTLFGLPIVARRKVHYGPVAPRE
SWELFIRRALVEGEFRTRGEFLAHNRELIEEVTDLEDRARRRDILVDEETLFDFYAERVP
QDIVNGKGFEAWRRKAERDNPKLLMFDREALLARATDDVTEQQYPDELSLDGVRYPLAYH
FAPGAEDDGVTMTVPAAMLSQLSASRLEWLVPGLLRDKCIALLKSLPKSMRRQVVPIPDW
VDAALASLTPGEGGLCEALGEFLRIKTGVRMHPDDWRVEQLDPHLIMNLKVVDHNGKVLG
QGRDLRELVRRFESAAGEGARALARSVEATEQLDGFPEQPLPESRVTHQAGIRVEAFPAL
VADGNGLKLELYDHPDKAREAHRSGVVKAAMARLPDQVRTIERLSGLDKCALLFTKVGSK
RALSDDLVRAVFTQVVAVDPLPRDAEALEARLAEVGADLVPHAEKLMATLQQALEGHLQV
TQALKGNLSLALALVYSDLKAQMKRLVHPGFITQAGPWLEAYPRYMEAALIRLEKAPRER
MRDQMHMQEVQDFEARLAARREAERKGAVEDPALVEFSWWIEELRVSLFAQQLGTAMPVS
TKRLEKRWAELTGRG
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaccgagacttcgactccgccccaacgccttgatgctgagacgcaactgaagcat
ttcgaagcggcactggacgacctgatgttgcgtgatcgccccggtctggccaaacgcctg
gccgggctgcgtcgtcgtgtccgcgagggcaagccgattgatcgcgcccttgccgaagtg
gccagtcaggttcaacgctctcagcagttactggcggcacgtcgcgggcggtcagtaacg
ctggaatatcctgaggcactcccggttgcagccaggcgcgacgacattctcgcggcactg
gctgagcatcaggtagtggtggtggctggtgaaacaggctcgggcaagactacgcagctg
cccaagctgtgtctcgaactggggttgggacgtcgtggcttgattggccatacccaacca
aggcgcctggcagcacgctcggtggcgtcgcgtcttgcagaggaaatgcaggtcagtctc
ggtgaccaggtcggttatcaggtgcgttttaccgaccagaccagtgatgacaccctggtc
aaactgatgaccgacggcattctgctggccgagacccgcaatgatcccgatctgctgcgt
tacgaaacattgatcatcgatgaggcgcacgaacgtagcctcaacatcgactttctgctc
ggttatctcaagcggctgctggagcggcgccgcgatctcaagatcattatcacctcggcg
accatcgacgttgagcgcttcagccagcatttcagcctcccgggtgacgatggaaagcca
aagcccgcgccggtggtggaagtttccgggcgcacctttccggtggacgtgctctatcgt
ccgttggtgcgcgatgccgaagacgaggaagaccgcacgctgagcgaaggtattctccac
gccgtcgaggagatcgagtccattgagcgtgaacggcgctggtccgcaggccctcgcgat
attctggtgttcctgcccggtgaacgcgagatccgagaaaccgccgacgtgctgcggcgt
gccgatttgcgccacaccgagattctgccgctctacgcgcggctgtccaatgccgagcag
aaccgtgtctttgcatcgcacagcggccgacgtatcgtgctggcaaccaatgttgccgaa
acctcgctgacggtacctggcattcgctacgtaatcgatccgggattggtgcgcatcagt
cgctacagttaccgcgccaagatacagcgtctacccgtggaagcggtcagtcaggccagc
gccaatcagcgtaagggacgttgtggccgagtggccgaaggggtctgtatccggctgtac
gacgaggaggactttctcggtcgcccggagtttaccgatccggaaatccgtcgtaccaat
ctggcctcggtgattctgtcgatgttgtcgctcaagctcggcagcatcgaagcctttccc
tttgtcgatccgcccgactcgcgctttgtgacagacggcttccgcctattgcatgagctg
ggcgcggtggatgaccagcaacgactgactgctgatggccgtcgcctggcgcgttttccc
attgaccctcgattggcacgtatgctgttggcgggtgatgagcagcagtgtctacgtgat
gtgttggtggtggtttcggcgcttgccgtgcaggaccctcgtgaccgcccggcggacaag
cgcgaggcagccgaccaggcgcaccgtcgttggcgagaccctgattcggacttcgtcgcc
atactcaacctgtggcacggcttcgagcaggcacgcgaggagttgtccggtaatcgcctg
cggcgctggtgccgtgaacactatctgaattatctgcgtctacgcgagtggcacgatacg
ttccgtcagttgcgacagttgttgcgcgaccaggatatccaggtacccgctccagcagtg
attgatgaggagcatgagcaggccggtgagttgcgtcgtcaggccagcgcttcgatgcat
cgcgcgctgttgaccggcttgttgtcgaatctcggtacgctgaccgagaaccgtgattat
ctgggcgcgcgtaatcgcaagttcatgatccacccttcatccgggttgtcgaagaagaca
ccgaagtgggtcatggccatggaattgatcgagacatcacggctgtttgcacgcaccgtg
gcgcgtatcgatccacagtggatcgagccgctggccgggcatctggtcaaacgtaattac
agtgagccgcactgggagatgaagcgcgcccaggtggtggcgttcgagcaggtaacgctg
ttcggcctgccgatcgtggctcgccgcaaggtgcattacggacctgttgcaccgcgtgag
tcatgggaactgttcatccggcgtgcgctggtggaaggggagttccgtacccgaggtgag
tttctggcgcataaccgcgagttgatcgaagaggtcacggatctggaggatcgcgcgcgc
cgacgtgacatcctcgttgacgaggagacgttgttcgacttctacgccgagcgggtgccg
caggatatcgtcaatggcaagggctttgaggcttggcggcgcaaggcggaacgcgataat
ccgaaattgctgatgtttgatcgcgaggccttgttggcccgcgctaccgatgatgtcacc
gaacagcagtatccggatgagctgagccttgatggggtgcgctacccgctggcctaccat
tttgcgcctggcgccgaggatgatggggtgaccatgacggtaccagcggcgatgttgtca
cagttgtcggcgtccaggttggagtggttggttcccggactgctgcgtgacaagtgcatt
gcgctgctgaaatccctgcccaagtcgatgcgccgacaggtagtgccgattcccgattgg
gtcgatgcagctctggcatctctgacgcccggtgaaggtgggctgtgcgaggcgctgggt
gagtttctgcggatcaagaccggggtgcgaatgcatcctgatgactggcgagtggagcag
ctggatccgcacttgatcatgaatctcaaggtcgttgatcacaacggtaaggtgctggga
cagggacgtgatctgcgtgagttggttcgacgcttcgagtcggccgccggagagggtgcg
cgtgctctggcgcgctcggtggaagccaccgagcagttggatggcttccctgagcaacca
ttaccggagtctcgcgtaacccatcaggccgggattcgcgtcgaggctttccccgctctg
gtggcggatggcaatgggctcaaactcgaactttatgaccatcctgacaaggcccgtgag
gcgcatcgcagtggtgtggtcaaggccgccatggcgcgcttgccggatcaggtacgcacc
attgagcgattatcaggattggacaagtgtgcactgttgttcaccaaggtgggcagcaag
cgtgcattgagcgacgatctggtgcgcgcggtcttcacgcaggtggttgccgtcgatccg
ctgccacgtgatgcggaggcgcttgaggcacgccttgcagaggttggcgcagatctggtg
ccgcatgccgagaaactcatggccacgctccagcaggcgttggaagggcacctgcaggtg
actcaggcgttgaaggggaatctgagcctggcgctggcgttggtatacagtgatctcaag
gcacagatgaagcgtctggtgcacccgggcttcataacccaggcaggtccttggctggag
gcgtatcctcgttatatggaagcggcattgatccgtctcgaaaaggctccgcgtgaacgt
atgcgtgaccagatgcacatgcaggaagtccaggactttgaggcacgcctggcggcacgc
cgcgaggcggaacgcaagggagcggtggaagacccggcgctggttgagttcagttggtgg
atcgaagagttgcgtgtatcacttttcgcgcaacaactggggacggcaatgccggtctcg
accaagcgtctcgaaaagcgctgggcagaattgactgggcgtggttag
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integrated database retrieval system
