Halomonas huangheensis: AR456_07775
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Entry
AR456_07775 CDS
T04119
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR456_07775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhu03019
]
AR456_07775
Enzymes [BR:
hhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AR456_07775
Messenger RNA biogenesis [BR:
hhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AR456_07775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_30
Hydrolase
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALM52193
UniProt:
W1N2L5
LinkDB
All DBs
Position
1723105..1724379
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AA seq
424 aa
AA seq
DB search
MSESDQTTAPAQSHKPKRRRRKPRRRQSSWDLRQFQVPAVAGKWRFHDFDLPLPLMRAIH
ALGFEYCTPIQAEALTHTLLGGDVVGKAQTGTGKTAAFLISMLAYFLEEEAPDGQKSGAP
RGLIVAPTRELALQIEKDAKALARFTSLNVTSVVGGMDYQKQRDGLNGNVDILVATPGRL
LDFQQKRDIDLSQVEVLVLDEADRMLSMGFIPDVKRIIRYTPKPVERQTFLFSATFTEDI
LNLASLWTHEASHVEIAVTVDNAADIDQRVYMVGDEDKQRLLVKLLQQEAFDRVMVFGNR
RDLVRSLLALLKKADINVAMLSGDVPQNQRIRTLEQFREGEVQVLVATDVAGRGIHIEDV
SHVINYTLPEDPEDYVHRIGRTGRAGAKGVSISFVGEEDAFSLPEIERFIGDKLPCEHPP
EGLL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggatcagaccaccgcaccggcccagagccacaagcccaagcgtcgtcgt
cgcaagccgaggcgccgccagtcgagctgggatcttcgccagtttcaggtgcctgccgtt
gcaggcaagtggcggttccacgacttcgatctgccactgccgttgatgcgggccatccac
gcgctgggtttcgaatactgtacgccgattcaggctgaagccctgacacataccctgctg
ggtggggatgttgtcggcaaggcgcagaccggtaccggcaagaccgctgccttcctgatc
tcgatgttggcctacttcctcgaggaagaagcgccggacggtcagaaatcgggcgctcca
cgaggcttgattgtggcgccgacccgcgagttggcgctgcagatcgagaaggatgccaag
gcactggcacgctttacctcgctgaacgtgaccagcgtggttggcggtatggactaccag
aaacagcgcgacggcctcaacggtaacgtcgatatcctcgtggccacaccaggtcgcctg
ctggacttccagcagaagcgcgatatcgacctcagtcaggtggaagtgctggtgctcgac
gaagccgatcgcatgttgtcgatgggcttcattcctgacgtcaagcgtatcattcgctat
acgccgaagccggtggagcgtcagaccttcctgttctcggcgacgtttaccgaggatatc
ctcaatcttgccagcctgtggacgcatgaggcttcgcatgtagagatcgcggtgaccgtc
gataatgccgcggatatcgatcagcgtgtgtatatggtcggtgatgaggacaagcagcgc
ctgctggtcaagctgttgcagcaggaagccttcgatcgcgtcatggtgttcggcaatcgt
cgcgatctggtgcgcagcctgcttgcgctgctcaagaaggccgatatcaacgtcgccatg
ctgtctggtgatgtgccgcagaatcagcgcattcgcacgctcgagcaatttcgcgagggc
gaggtgcaggtgctggtggccacggacgttgctgggcgtggtatccacatcgaagatgtc
agtcacgtgatcaattacacgctgcctgaagatcccgaggattatgtgcaccgaatcggt
cgtaccggtcgtgccggcgccaagggtgtgtcgatcagcttcgtcggtgaggaagatgcc
ttctcgctgcccgagatcgagcgctttatcggcgacaagctgccctgcgaacatcccccc
gaaggtcttctctga
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