Halomonas huangheensis: AR456_08240
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Entry
AR456_08240 CDS
T04119
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hhu
Halomonas huangheensis
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhu03016
]
AR456_08240
Enzymes [BR:
hhu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AR456_08240
Transfer RNA biogenesis [BR:
hhu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AR456_08240
Prokaryotic type
AR456_08240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALM54596
LinkDB
All DBs
Position
1833635..1834579
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AA seq
314 aa
AA seq
DB search
MSLFHFLDERTPLKGRLALSVEYDGTSYCGWQRLKHAPSVQGALEKALGKIAGTDITVHC
SGRTDSGVHATRQIAHFDPPVARSEKAWVFGGNANLPRDIAIRWIREVPDDFHSRFKALA
RRYRYVILNQPSRPVLERANATWCRDPLDADAMHQAAQVLVGEHDFSSFRAAGCQSKTPW
RHLHFIEVHRHGPLVVVDLQANAFLHHMVRNIVGALVTVGRGEQGTDHIARLLALKDRTL
GDVTAPGCGLHFVDTVYDEVWQLPKEPLGPNLLAFLGEWTGERPLPDCPMVAYRRGQPIA
ADVEEQMRRRLGRC
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtttcattttctcgatgaacgtacgccactgaagggccgcctggccttgagt
gtcgagtatgatggcacttcgtactgtggctggcagcgtctcaagcacgcaccctcggtt
cagggggcgctggagaaagcgcttggcaagatcgccgggacggatatcacggtacattgc
agcgggcgtactgattccggagtgcatgctacgcgccagatcgcgcattttgatccccca
gtggctcgttccgagaaggcctgggtgttcggtggtaatgccaacttaccgcgtgacatc
gcgattcgctggattcgagaagtgcccgatgacttccactctcgtttcaaggccctggct
cgccgctatcgctatgtgattctcaatcagcccagccggccagtattggagcgggccaat
gccacctggtgtcgagatccactcgatgccgatgccatgcatcaggccgcccaggtactg
gtgggtgagcatgacttctcgagtttccgcgccgcgggctgtcagtcgaagacgccctgg
cgccatctgcatttcattgaagtgcatcgccacggcccactggtggtggtggatctgcag
gccaatgcctttctgcatcatatggtacgtaatatcgtcggtgcgttggtgacggtagga
cggggtgagcagggcaccgaccatattgctcgattgctggcgctcaaggatcgcaccctt
ggtgatgtcaccgcgcctggctgtgggctgcattttgtcgataccgtttatgacgaggta
tggcagttgccgaaggaacctctggggcccaatctattggcgtttctcggcgagtggact
ggtgagcgcccactgcccgactgtccgatggttgcgtatcggcgcggacaaccgatcgcc
gccgatgtggaagaacagatgcgccgccgcctggggcggtgctga
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