Halomonas huangheensis: AR456_10965
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Entry
AR456_10965 CDS
T04119
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR456_10965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhu03019
]
AR456_10965
Enzymes [BR:
hhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AR456_10965
Messenger RNA biogenesis [BR:
hhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AR456_10965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
UTP25
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ALM52740
UniProt:
W1NAY1
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All DBs
Position
2473963..2475387
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AA seq
474 aa
AA seq
DB search
MSFSDLGLRAELLRAIEAQGYQSPTPIQRQAIPLVLEGRDLLASAQTGTGKTAGFTLPLL
QRLSGGQRPRARQVRALVLTPTRELAAQVGESVREYGRHLSLTSHVIFGGVGQQPQIDAV
RPGLDILVATPGRLLDLHQQRHIDLSRVEILVLDEADRMLDMGFIHDIRRVLKLLPEKRQ
NLLFSATFSNEIQRLAEGLLDNPAKVEVARRNTTAEKVDQAVYRVDRERKRELLSHLISS
QQWFQVLVFTRTKHGANRLAEHLGKSDIPAMAIHGNKSQSARTRALDAFKSGQLQVLVAT
DIAARGLDINELPHVVNFELPNVAEDYVHRIGRTGRAGKEGLAVSLVCVDEHGLLKNIER
LIKRDLEKHIEPGFEPDPNARPEPIENGRNGRGRGGSRSKDGARSSSGNGQARANNGNRS
NSSNRGNSDSRGNDGNRGSRSNGGNRDSNGGNRGNGDAAAPRRRRRNSTRTRQA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgatctcggcctgcgtgccgaattgctgcgtgccatcgaggcgcaaggc
taccaatcccctacccctatccagcgccaggcgattccgcttgtccttgaaggacgcgat
ctactggccagtgcccagacaggcaccggcaagacagcaggatttacactccccctgctg
caacgcctcagcgggggccaacgcccccgtgcacgccaggtgcgtgccctggtgctcacc
ccaacccgtgagcttgccgcgcaggtcggcgagagcgtacgtgaatatggtcgccacctg
tctcttaccagccatgtcattttcggcggtgtcggccaacaacctcagatcgacgccgtg
cgtcccgggctcgacattctggtcgccactcccgggcgcctgctcgatctgcaccaacaa
cgccacatagacctgagccgcgtcgagatcctcgtgctcgatgaagccgaccgcatgctc
gacatgggctttatccacgatattcgacgcgtgctgaagctgcttcccgagaagcgtcag
aacctgctgttctctgcgaccttctccaatgagatccaacgcctcgccgaaggactgctc
gacaatccggcgaaggtcgaggttgcacgtcgcaataccaccgccgagaaagtcgaccag
gcagtgtatcgtgtcgaccgcgagcgtaaacgcgagctgctgtcacatctgatcagttca
cagcaatggttccaggtactggtgttcaccagaaccaaacatggtgccaaccgcctcgcc
gagcacctcggcaagagcgacattccggcgatggcaattcacggcaacaagagccagtcg
gctcgtacccgtgcgctggatgccttcaagtccggacaattgcaggtactggttgccacc
gacatcgctgcacgtggccttgatatcaacgaactgccccacgtggtgaacttcgaactg
cccaacgttgccgaggattatgtccaccgtattgggcgtaccggccgcgccggcaaggaa
ggcctggcggtatctctggtctgtgtcgatgaacacggtttgctgaagaacatcgaacgc
ctgatcaagcgggatcttgagaagcatatcgaaccgggctttgaacctgatcccaatgca
cgccccgagccgatcgagaatggccgtaatggtcgcggccgtggtggcagccggtcaaag
gatggggcacggagcagttccggtaacggacaggctcgagccaacaacggcaaccgcagc
aacagcagtaaccgcggtaacagcgacagccgtggcaacgacgggaaccgtggtagccgc
agcaatggcggcaaccgagacagcaacggcggaaaccgtggcaatggcgacgccgcagct
cctcgccgccgtcgtcgcaacagcacacggacgcgccaggcgtaa
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