Halomonas huangheensis: AR456_17370
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Entry
AR456_17370 CDS
T04119
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03410
Base excision repair
hhu03430
Mismatch repair
hhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AR456_17370
03430 Mismatch repair
AR456_17370
03440 Homologous recombination
AR456_17370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhu03400
]
AR456_17370
DNA repair and recombination proteins [BR:
hhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AR456_17370
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AR456_17370
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AR456_17370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALM53844
UniProt:
W1N9H7
LinkDB
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Position
complement(4027682..4029454)
Genome browser
AA seq
590 aa
AA seq
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MSQALSPLILAREVNELLYQRGVAAGLSELQARILAGRLAQYEGEVEPLIDPALKHLAHP
GLLADGPRAAERIAQAVAEGEHIGILTDYDVDGITSHVVIRRTLNELFGVPEQRLHSLIG
HRIHDGYGISLPLVERTLKLSPRPSLVITADCGSSDELRIARLREAGIDVVVSDHHALPI
EGPPPSAYATVNPTRSDCDYPDATIAGCMVAWLLMSLTRSTLVEMGILPSSVPKLSAWLS
YVALGTVADCVSLGASAINRAVVRHGLNLINRMNEPCWRAMAERLGEDSVPFNAETLGFQ
MGPRINARSRLDDPYAALHFMLATDDGVAQRHLQVLDDDNQSRKAIEADMAEQARALAST
ALAADEPIIIVYLEDGHPGVQGIVASRLVQSYGRPTVVLTPAAEAGMLTGSGRSIEALHL
REALQRAYELAPESLPRFGGHRGAAGVGVPHERLDEFRTALIQAVSEQLRGMELVPRLFT
DGELQGHQLQLATLDEIDALGPYGREFDAPLFAGQFLIERVRPVGDGSHLMMELSLQRQS
WKAIWFRAIKPGDVPPFSEGDMVHCAYKLNRNRFRGRESLQLMIEHAHPL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcgttatccccgctgatccttgctcgtgaagttaacgagctgctctaccaa
cgtggcgtagcagcagggctgtcggagttgcaggcgcggattctggcgggtcgtctggcg
cagtacgagggtgaagtcgagccactgattgatccagcgctcaagcatctggcgcatcct
ggcctgctggccgatgggccacgagctgccgagcgtatcgcccaggcggtggccgaaggt
gagcatatcggcattctcaccgactacgatgtggatggcatcacctcccacgtcgtgatc
cgtcgcaccctgaatgaattgttcggtgttccggagcaacggctgcatagtctgatcggc
catcgtattcacgatggttacggcatcagtctgccgctggttgagcgtaccttgaagttg
tcaccacgacccagcctggtgattacggctgactgtggctcgtctgatgagctgcgaatt
gcccgcttgcgtgaggcgggcatcgatgtcgtggtcagtgaccaccatgccttgccgata
gaaggaccaccgccatcggcgtatgccacggtaaacccgactcgcagtgactgtgactat
cctgacgctaccatcgctggctgtatggtggcatggctgctgatgtcgttgacacgcagc
acactggtggagatgggcatactgccgagctcggtacccaaactgtcggcctggctgtcc
tatgttgcgttgggcaccgtcgctgattgtgtatcgctgggggccagcgccatcaaccgc
gcggtagtgcgtcatggcttgaacctgatcaatcgcatgaatgagccctgctggcgggcc
atggctgaacgcctcggcgaagatagcgtgcctttcaacgcggagacgctcggctttcag
atggggccacgtatcaacgctcgttcacgtctggatgatccctatgcggcactgcatttc
atgctggccaccgacgatggcgttgcccagcgccaccttcaggtgttggatgacgataat
cagtcgcgcaaggccatcgaagcggacatggcagaacaggcgcgtgcactggccagtact
gccctggcggcagatgagccgatcatcatcgtttatctcgaagatggccaccccggcgtt
cagggaatcgtcgcatcgcggttggtgcagtcctatggtcgcccgacggtagtgctcacc
cccgccgccgaggcggggatgctgacggggtccgggcgttccatcgaagcgctccatctg
cgcgaagcattgcagcgcgcttatgagttggctcctgagtcattgccgcgttttggcggc
caccgcggtgccgcgggtgttggtgtgccccacgagcgtctggatgagttccgaacggca
ctgatccaggcggtcagcgagcagctacggggcatggagctggtgccccgattgttcacc
gatggcgagctccagggccatcagctgcaactggctaccctcgatgaaatcgacgccctg
ggcccctacgggcgtgaattcgatgccccgttgtttgccggtcagttcctgatcgagcgt
gtccgcccggttggcgatggcagccacctgatgatggagctttcattgcagcgtcagagc
tggaaagcgatctggtttcgtgccatcaagcccggcgatgtgccaccgttcagtgaaggt
gacatggtgcactgcgcctacaagctcaatcgcaatcgcttccgcggccgtgaatccctg
cagttgatgatcgagcatgcgcaccccctgtga
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