Halomonas huangheensis: AR456_17465
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Entry
AR456_17465 CDS
T04119
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AR456_17465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhu03400
]
AR456_17465
Enzymes [BR:
hhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AR456_17465
DNA repair and recombination proteins [BR:
hhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AR456_17465
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AR456_17465
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AR456_17465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALM53860
UniProt:
W1N9F3
LinkDB
All DBs
Position
complement(4048411..4049901)
Genome browser
AA seq
496 aa
AA seq
DB search
MAQSTAAPLTYLWHDYETFGADPRRDRPSQFAAIRTDADFNEIGEPVELFCKPADDALPH
PMACLITGITPQQARRKGQPEAEFAGAIFNEMSVPGTCALGYNSLRFDDEVSRHLFYRNL
IDPYAREWQNGNSRWDLIDVVRAFHALRPEGIEWPKREDGATSFRLEDLTAANAIEHAGA
HDALADVRATIALARLLHEKNANLFDYLLSLRNKRQVASRLDLSQRRPVLHISRRYPASR
GCSALVIPLAEHPSNPNGVIVFDLSVDPGELLQLSAEQVRQRVFVSNDDLAEGVGRIPLK
VIHINKSPVIFPPSVLKDVSGPRQGEYGDIVERLELDMNQCREHYKRIAADPSVADKVRE
VFADAHPEPPHDPDLMLYSGGFFSPADRQQMQRVRDTDPWDLVDARFAFQDPRLEEMLFR
YRARSYPDTLTGEEQARWEAQRWERMNDSTVSSLTLKDFAREIERLNQTSLSDRERQILE
EMVMFVESIMPPQAFG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtccactgccgctccgctgacttacctctggcacgattacgaaacctttggt
gccgacccgcgccgtgacaggccatcgcagttcgcggcgattcgcactgatgcggatttc
aacgaaatcggtgagcctgtggagctgttctgcaagccagccgatgatgcgctgccacat
cccatggcatgcttgatcacgggcattacaccgcaacaggctcgccgcaagggtcaacct
gaagccgagttcgccggtgccatcttcaacgagatgagtgtgccgggaacctgtgcgctg
ggctacaacagtctgcgtttcgatgatgaggtcagtcgtcatctgttctatcgcaatctc
attgacccctatgcacgcgagtggcagaacggcaattcgcgctgggatttgatcgatgtg
gtacgcgcctttcatgccttgcgaccggaaggcattgagtggccgaagcgcgaagacgga
gcgacgagctttcgtctcgaggatttgaccgcagccaatgctatcgagcatgcaggagcg
catgatgcgctggctgatgtgcgcgccaccatcgcgcttgccaggctgttgcacgagaag
aacgcaaacctgttcgactatctactgtcactgcgcaacaagcgtcaggtggcctcgcgt
ttggacctctcgcaacgacgcccggtattgcatatctcgcgccgttatccagccagccga
ggatgtagtgcgctggtgattccgctggcggagcatccttccaaccccaatggtgtcatt
gtcttcgatctgtcggtggaccctggggagctgctgcaactgtctgcggaacaagtgcgt
cagcgggttttcgtcagtaacgatgatcttgctgaaggggttggccgtatcccattgaag
gtcatccatatcaacaagagcccggtgatctttccgcccagtgtactcaaggatgtctcc
gggccacgtcagggcgagtacggtgatattgtcgaacgccttgaactcgacatgaaccag
tgtcgcgagcactacaagcgtatagccgccgatccttccgtcgctgacaaggtgcgtgaa
gtctttgccgatgcacatcctgaaccgcctcatgacccggacctgatgttgtactccggc
ggcttcttctccccggcggaccgtcaacagatgcagcgtgtccgagataccgacccatgg
gatctggtcgatgctcgtttcgcctttcaggatccacgtctcgaagagatgttgttccgt
tatcgcgcacgcagctatcccgataccctgaccggtgaagagcaggcgcgctgggaagcg
caacgttgggagcgtatgaacgattcgacggtctcgagcctgacgctcaaggattttgcc
cgcgagatcgaacgtctcaatcagacatcgctatccgaccgcgagcgccagatactcgag
gagatggtgatgtttgtcgaatcgatcatgccgccccaggcattcggttaa
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