Hyaena hyaena (striped hyena): 120220562
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Entry
120220562 CDS
T07257
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03013
Nucleocytoplasmic transport
hhv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120220562 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
120220562 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhv03019
]
120220562 (THOC1)
03041 Spliceosome [BR:
hhv03041
]
120220562 (THOC1)
Messenger RNA biogenesis [BR:
hhv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120220562 (THOC1)
Spliceosome [BR:
hhv03041
]
Complex C
Other components
EJC/TREX
120220562 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120220562 (THOC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
120220562
NCBI-ProteinID:
XP_039073617
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKAGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcgatttacgaagtct
accagagaagccctgaacaacaaaaatatcaagccattgttgaataccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcatctacaccttttgtattattgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatctactacgtatgtgc
aatgatctcctaagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcatactgaggatagagaagaaggaatggatgttgaggaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtttttaagagttataaattagatgatactcag
gcctccaggaaaaagatggaagaattaaaagcaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagcgacagtaactttcgccgacac
atccttttgcaatatctcattttattccagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgtattaactgatgagcaatcactgtggattgaagatacgacaaaatcagtt
tatcaactactatctgaaaacccacctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcgtggaaaaatgaaggctgcccaagctttgtg
aaagaaagaacatcagacacgaagccaacaagagtagctcgcaagagaacggcaccagag
gacttcctagggaaaggacccaacaaaaagattctaatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataacatggaagcctgcaaatcagagacaagggaatacatg
ccaactttggaggaattctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaggctgtgaacaattcaaattatggttggagagccctgagactacta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgcccgaa
tatcttgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtgacaggggaacaaatagaagtatttgccaacaag
ctgggcgaacagtggaagatcctggctccctacttggaaatgaaagactcagaaattaga
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctactagtcgcctgg
caagatcaagagggagtacatgctacacctgagaatctgatgaatgcactgaataagtcc
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
