Hyaena hyaena (striped hyena): 120221161
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Entry
120221161 CDS
T07257
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
hhv04142
Lysosome
hhv04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120221161 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120221161 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
120221161 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhv02000
]
120221161 (NPC1)
Transporters [BR:
hhv02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
120221161 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
120221161
NCBI-ProteinID:
XP_039074343
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MTARGPAFGLLLLLLCPAQVFTQSCIWYGECGIASGDKRYNCKYSGPPKPLPKDGYDLVQ
ELCPGFFFDSVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELQYYVGESFANAMYNACRDVEAPSSNDKALGLLCGKD
AEACNATNWIEYMFSKDNGQAPFTITPIFSDLPAHGMEPMNNATKGCDESVDEVTGPCSC
QDCSIVCGPKPQPPPPPVPWRILGLDAMYVIMWTTYMAFLLVFFGAFFALWCYRKRYFVS
EYTPIDSNIAFSVNARDKGMAWLLTSTLPSSPALPGEASCCDALGAAFEGCLKRLFSQWG
SFCVRNPGCIIFFSLAFIAACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDTHFGPFF
RTEQLIIQAPHTSAHTYEPYPSGSDVPFGPPLDIEILHQVLDLQIAIENITASYNNETVT
LQDICVAPLSPYNRNCTILSVLNYFQNSHSMLDRKIGDDFFVYADYHTHLLYCVRAPASL
NDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAW
EKEFINFVKNYENPNLTISFTTERSIEDELNRESNGDIFTVIISYAIMFLYISIALGHIK
SCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGIPLTLIVIEVIPFLVLAVGVDNIF
ILVQAYQRDEHLQGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVHTFSLF
AGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDVLCCVRGSEDGTSVQASESCLFRLFKH
SYSPLLLKDWMRPIVVAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVMDYFKSLKYLH
AGPPVYFVLEEGHDYTSLKGQNMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPSSWID
DYFDWVKPQSSCCRVYNSTDQFCNASVADPACIRCRPLTQEGKQRPQGGDFMRFLPMFLS
DNPNPKCGKGGHAAYGSAVNILGNDTAVGATYFMTYHTVLQTSADFTDAMRKANLIASNI
TKTMGLEGSNYRVFPYSVFYVFYEQYLTIIDDTIFNLSVSLGAIFLVTVVLLGCDLWSAV
IMCVTIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVQ
RAEEALAHTGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLP
VLLSYIGPSINKAKSLATQEQYKGTEREQLLNF
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcgcggcccagctttcggcctcctgctgctgctgctgtgtcccgcgcaggtg
ttcacgcagtcctgcatctggtatggagagtgcggaattgcatctggagataagaggtac
aactgcaaatattcagggccacccaaacccctgccgaaggatggctatgacttagtgcag
gaactctgtccaggattcttctttgacagtgtcagtctttgttgtgatgtgcagcagctc
cggacacttaaagacaacctgcagctgcccctacagtttctgtccagatgtccatcctgt
ttctataacctaatgaacctgttttgcgagctgacgtgtagccctcggcaaagtcagttt
ctgaatgttacagcaactgaagattatgttgatcctgttacgaaccagacgaaaacaaat
gtgaaagaattacagtactacgttggtgagagttttgccaatgccatgtacaacgcctgc
cgggacgtggaggccccttccagtaatgacaaagccctgggactgctgtgtgggaaggat
gccgaagcctgcaatgccaccaactggattgagtacatgttcagtaaggacaacggccag
gcgcctttcaccatcacacccattttttcagatcttccagcccatgggatggagcccatg
aacaatgccaccaagggctgtgacgagtctgtggatgaggtcacggggccgtgcagctgc
caggactgctccatcgtttgtggccccaagccccagcccccgccccctcctgtgccctgg
agaatcttgggcttagacgccatgtacgtcatcatgtggaccacctacatggcatttctg
cttgtgttttttggagcattttttgctctgtggtgctacagaaaacgctattttgtctcc
gagtacacccccattgatagcaacatagctttctctgtaaatgccagggacaaaggaatg
gcttggctcttaacctccaccctcccttcctctcccgctcttccaggggaggcgtcctgc
tgcgacgcgcttggtgcggcatttgagggctgtttgaagcggctcttctcccagtggggt
tctttctgtgtccggaacccaggctgcatcatcttcttctcgctggccttcattgccgcc
tgttcttcaggcctggtgtttgtgcgggtcacaaccaatccggtggacctgtggtcagcc
cccagcagccaggcgcgcctggagaaagagtactttgacacgcactttgggcctttcttc
cgcacggagcagctcatcatccaggccccccataccagtgcacacacttacgagccatac
ccctcggggtctgacgtgcccttcggacctccacttgacatcgagatcttgcaccaggtt
cttgacttacagatcgccatcgaaaatatcactgcatcttacaacaatgagactgtgaca
cttcaggacatctgcgtggcccccctctcaccctataacaggaattgcaccatcctgagc
gtgttaaattacttccagaacagccattccatgctggaccgtaaaataggagacgacttc
ttcgtgtatgcagattatcatacgcacttgctgtactgtgtacgggctcctgcctctctg
aacgataccagtttgctccatgatccttgcctgggtacattcggtgggccagtgttcccg
tggcttgtgttgggaggctatgatgatcaaaactataataatgccacggcccttgtgatt
acctttcctgtcaataattactataatgatacagagaagctgcagagggcccaggcctgg
gaaaaagagtttattaattttgtgaaaaactacgagaatccaaatctgaccatttctttc
actaccgagcgaagtattgaagacgaactaaatcgtgaaagtaacggtgacattttcact
gttataatcagctatgccatcatgtttctgtacatttccatagccttggggcacatcaaa
agctgtagcaggcttctagtggactctaaaatctccctcggcatcgcggggatcctcatt
gtgctgagctcggtggcgtgctcattgggcatcttcagctacattgggatccccctcacc
ctcattgtgatcgaagtcatcccattcctggtgctggctgttggggtggacaacatcttc
attctggtccaggcctaccagcgagatgaacatcttcaaggagagactctggatcagcag
ctgggcagggtcctaggagaagtggctcctagtatgttcctgtcctccttttcagaggca
gtggcatttttcttaggagcactctcaaagatgccagccgtccacaccttctctctgttt
gccgggatggcagtcctcatcgacttccttcttcagattacctgttttgtgagtctcttg
gggttagacattaagcggcaagagaagaaccgtctggatgttctttgctgtgtcagaggc
tctgaagatggaactagtgtgcaggcttctgagagctgcttgtttcggctcttcaagcac
tcttactctccacttctgcttaaggactggatgagaccaattgtggtagcagtattcgtg
ggtgttctgtcattcagtatcgcggtcctgaacaaagtggaaattggattggatcagtct
ctttcaatgccagatgactcctacgtgatggattatttcaagtccctcaagtacctgcat
gcaggtccacccgtgtactttgtcttggaggaagggcacgactacacctccctgaaaggg
cagaacatggtgtgcggaggcatgggctgcaacaacgattccctggtgcagcagatcttc
aacgcggcccagctggacagctatacccgaatcggctttgctccctcctcctggatcgat
gattactttgattgggtcaagcctcagtcttcttgctgtagagtctacaacagcaccgac
cagttctgcaacgcatcagtggctgaccctgcctgcatccgctgcaggcccctcacccag
gagggcaaacagaggcctcaaggtggagacttcatgagattcctgcccatgttcctttct
gataacccgaaccccaagtgcggcaaagggggacatgctgcttacggttcagcggttaac
atcctcggcaatgacacggccgttggagccacttacttcatgacctaccacactgtgctg
cagacctctgccgactttactgacgccatgcgaaaagccaacctcatcgccagcaacatc
accaaaaccatgggccttgaaggaagtaattaccgtgtgttcccatacagtgtgttctat
gtcttctacgaacagtacctgaccattattgatgacacgatctttaacctcagcgtgtcc
ctgggagccatcttcttggtgaccgtggttctcctgggctgtgatctgtggtctgcagtg
atcatgtgtgtcaccatcgccatgatcttggtcaatatgtttggtgtcatgtggctgtgg
ggcatcagtctgaacgcagtatccttggtcaacttggttatgagctgtggcatttccgtg
gagttctgcagccacataacgagagcgttcacagtgagcacgaagggcagccgtgtgcaa
cgggcagaagaggcgcttgctcacacgggcagttctgtgttcagtggaatcacactaaca
aaatttggagggattgtggtgttggcctttgccaaatctcagattttccagatattttac
ttcaggatgtatttggctatggtcttactgggagccactcacggcttgatcttcctcccg
gtcttactcagctacataggaccatcaataaataaagccaaaagtttggccactcaagag
caatacaaaggtacagaacgagaacagctcctaaatttctag
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integrated database retrieval system
