Hyaena hyaena (striped hyena): 120222042
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Entry
120222042 CDS
T07257
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv00100
Steroid biosynthesis
hhv01100
Metabolic pathways
Module
hhv_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120222042 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hhv01006
]
120222042 (FDFT1)
Enzymes [BR:
hhv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
120222042 (FDFT1)
Prenyltransferases [BR:
hhv01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120222042 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
DND1_DSRM
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
120222042
NCBI-ProteinID:
XP_039075655
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MAAAACGTKAMSLFKRTLVLSPAAAPRGTGAGSPPRGCPLPPAAWPSKDWPRGEGACSRL
RSPPAASLLPHSHSCSSSASPTTTVCLLCPQDSLSSSLKTCYKYLNQTSRSFAAVIEALD
GEMRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVL
EDFPTISLEFRNLAEKYQTVIAEICRKMGFGMAEFLVKQVTSEQEWDKYCHYVAGLVGIG
LSRLFSASELEDPLVGEDIERANSMGLFLQKTNIIRDYLEDQREGREFWPQEVWGKYVKK
LGDFAKPQNIDSAVQCLNELITNTLHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAA
CYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSSKTRQI
ISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccgcctgcggcaccaaggccatgtccctgttcaagcggaccttggtgctg
agccccgccgcggcgccccggggtacgggcgcgggctccccgccgcgcggctgccccttg
cctcccgccgcctggccctccaaggactggccacgcggagagggtgcctgcagccggctg
cgtagcccgccagcggccagcctcctgccccattcccactcctgctcctcctcggcgtcc
cccaccaccaccgtgtgtctcctctgcccgcaggactcgctcagcagcagcttgaaaact
tgctacaagtatctcaatcagactagtcgcagtttcgcagctgtcatcgaggcgctggat
ggggaaatgcgccatgcggtatgcatattttatctggtcctccgagctctggacaccctt
gaagatgacatgaccatcagtgtagagaagaaggtcccactgttacacaacttccactct
tacctttatgagccagactggcggtacatggagagcaaggagaaggatcgacaagtgcta
gaggacttcccaacgatctccctcgagtttagaaatctggctgagaaatatcaaacagtg
attgctgagatttgccggaaaatgggatttgggatggcggagtttttggttaaacaagtg
acgtccgaacaggagtgggacaagtactgtcactatgtcgctgggctggtgggaattggc
ctttcccgtctgttctccgcctcagagttagaggaccccctggtcggtgaagatatagag
cgtgccaattctatgggcctgtttctgcagaaaacaaacatcattcgtgattacctggaa
gaccaacgagaaggaagggagttttggcctcaagaggtttggggcaagtatgttaagaag
ttgggtgattttgcaaagccacagaatattgactcggccgtgcagtgcctgaacgaactt
ataaccaacacactgcaccacatcccagatgtcatcacttacctttcaagacttagaaac
caaagtgtgtttaacttctgcgctattccacaggtaatggccattgccactttggctgcc
tgttacaataaccagcaggtattcaaaggcgtagtgaagatccgaaaaggacaagcagta
actctaatgatggacgccacgaatatgccggctgtcaaagctataatataccagtatatg
gaagagatttatcatagaatccccagctcagacccatcttctagtaaaacaagacagatc
atctccaccatcaggacacagaatcttcccaattgtcagctgatctcccgaagtcactac
tcccccatatacctgtcatttgtcatgctcctggctgccctgagctggcagtatctgagc
accctgtcccaggtcacagaggactatgttcagactggagagcactga
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