Hyaena hyaena (striped hyena): 120222073
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Entry
120222073 CDS
T07257
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120222073 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhv03041
]
120222073 (SF3B1)
03036 Chromosome and associated proteins [BR:
hhv03036
]
120222073 (SF3B1)
Spliceosome [BR:
hhv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
120222073 (SF3B1)
Complex B
120222073 (SF3B1)
Complex C
U2 SnRNP specific factors
120222073 (SF3B1)
Chromosome and associated proteins [BR:
hhv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120222073 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
120222073
NCBI-ProteinID:
XP_039075688
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MRRDYPPQLFFSVAAAASGSSWERQFRLCVRVDKMAKIAKTHEDIEAQIREIQGKKAALD
EAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSSTSLLGQKKPGYHA
PVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPK
MNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRRWDQTADQ
TPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAA
TPGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGET
PTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAW
RWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHM
QTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKN
GTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDL
VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRN
TTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSL
VEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAF
LKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYI
KTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRK
MVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVK
PYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
AEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHV
IQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPR
IYNDDKNTYIRYELDYIL
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagagactatcccccacagctatttttctccgtggcagcggcggcgagcggaagt
tcttgggagcgccagttccgtctgtgtgttcgagtggacaaaatggcgaagatcgccaag
actcacgaagatattgaagcacagattcgagaaattcaaggcaagaaggcagctcttgat
gaagctcaaggagtgggccttgattctacaggttattatgaccaggaaatttatggtgga
agtgacagccgatttgctggatacgtaacatcaattgctgcaactgaacttgaagatgat
gacgatgactactcatcatctacaagtttgcttggtcagaagaagccaggatatcatgcc
cctgtggcattgcttaatgatataccacaatcaacagaacagtatgatccgtttgctgag
caccgacctccaaagattgctgaccgggaagatgaatacaaaaagcacaggcggaccatg
ataatatccccagagcgtcttgatccttttgcagatggagggaagacccctgatcctaaa
atgaatgctaggacttacatggatgtaatgcgagaacagcatttaaccaaagaagagaga
gaaattaggcaacaactagcagaaaaagctaaagctggagaactaaaagttgtcaatgga
gcggcagcgtcccagcctccctcaaaacgaaaacggcgttgggatcaaacggctgaccag
actcctggtgccactcccaaaaagctatcaagttgggatcaagcagagacccctggacat
accccttccttaagatgggatgagacacctggtcgtgcgaagggaagtgagactcctgga
gcaacaccgggctcaaaaatatgggatcctacacctagccacacaccagcaggagctgct
actcctggacgtggcgatacgccaggccatgcaacaccaggccacggaggtgcaacttcc
agtgctcgtaaaaacagatgggatgagacccccaaaacagaaagagatactcctgggcat
ggaagtggatgggctgagactcctcgaacagatcgaggtggagattcaattggtgaaaca
ccaactcctggagccagtaaaagaaagtcacgttgggatgaaacaccagctagtcagatg
ggtggaagcactcctgttctgacacctggaaagacacctattggcacaccggccatgaac
atggctacccctactccaggtcacataatgagtatgactcctgaacagcttcaggcttgg
aggtgggaaagagaaattgatgagagaaaccgcccactttctgatgaagaattagatgcc
atgtttccagaaggatataaggtacttccccctccagctggttatgttcctattcgaact
ccagctcgaaagctgacagcaactccaacgcctttgggcggtatgactggtttccacatg
caaactgaagatagaacaatgaaaagtgttaatgaccaaccatctggaaatctaccattt
ttaaaacctgatgatattcagtactttgataaacttttggttgatgttgatgaatcaaca
cttagtccagaagagcaaaaagagagaaaaataatgaagctgcttttaaaaattaagaat
ggaacacctccaatgagaaaggccgcattgcgtcagattactgacaaagctcgtgaattt
ggagctggtcctttgtttaatcagattcttcctctactgatgtctcccacacttgaggat
caagagcgtcatttacttgtgaaagttattgatcgaatattatacaaacttgatgactta
gttcgaccatatgtgcacaagatccttgtggtcattgaaccattgctgattgatgaagat
tactatgctagagtggaaggtcgagagattatttctaatttggcaaaggctgctggtctg
gctactatgatctctaccatgagacctgatatagataacatggatgagtatgttcgtaac
acaacagctagagcttttgctgttgtagcctctgccctaggcattccttcgttgttgccc
ttcttaaaagctgtgtgtaaaagcaagaagtcctggcaagcgaggcacactggtattaag
attgtacagcaaatagctattctcatgggctgtgccatcttgcctcatctcagaagttta
gttgaaatcattgagcatggtcttgtggatgagcaacagaaagttcggaccattagtgct
ttggccattgctgccttggctgaagcagcaactccttatggtattgaatcttttgattct
gtgttaaagcctctatggaagggtatccgtcaacatagaggaaagggtctggcagctttc
ttaaaggctattgggtatcttattcctcttatggatgcagaatatgccaactattatact
agagaagtgatgttaatccttattcgagaatttcagtcacctgatgaagaaatgaaaaaa
attgttctgaaggtggtaaagcagtgttgtggaacagatggtgtagaagcaaactacatt
aaaacagagattcttcctcctttttttaaacacttctggcaacacagaatggctttggat
agaagaaattaccgacagttagttgatactaccgtggagttggcaaacaaagtaggtgca
gccgaaattatatccaggattgtggatgatctgaaagatgaagctgaacagtacagaaaa
atggtgatggagacaattgagaaaattatgggcaacttgggggcagcagatattgatcat
aaacttgaagaacagctgattgatggtattctttatgctttccaagaacagactacagag
gactccgtaatgttgaatggctttggcacagtggtcaatgctcttggcaaacgagtcaaa
ccgtacttgcctcagatctgtggtacagttttgtggcgtttaaataacaaatcagcaaaa
gttaggcaacaggcagctgacttgatttctcgaactgctgttgtcatgaagacttgtcaa
gaggaaaaattgatggggcacttgggtgttgttctgtatgagtatttgggtgaagagtac
cctgaagtattgggaagcattcttggagcactgaaggccattgtaaatgtaataggtatg
cataagatgaccccaccaattaaagatctcctgcctagactcacccccatcttaaagaac
aggcatgaaaaagtacaagagaattgtattgatcttgttggacgtattgctgacagggga
gctgaatatgtgtctgcaagagaatggatgaggatttgttttgagcttctggagctctta
aaagctcacaaaaaagctattcgtagagctacagtcaacacatttggttacattgcaaag
gccattggccctcatgatgtattggctacactcttaaacaacctcaaagttcaggaaagg
cagaacagagtttgtaccactgtagcaatagctattgtcgccgaaacatgttcacccttc
acagtactacctgccttaatgaatgaatacagagttcctgagctgaatgttcaaaatgga
gtgttaaaatcactttccttcttgtttgaatatattggtgagatgggaaaggactacatt
tatgctgtaacaccattacttgaagatgctttaatggatagggaccttgtacacagacag
acagccagcgcagtggtgcaacacatgtcacttggggtttatggatttggttgtgaagat
tcactgaatcacttgttgaactatgtatggcccaatgtgtttgagacctcaccccatgta
attcaggcagttatgggagccctggagggcctgagagttgctattggaccatgtagaatg
ttacagtactgtttacagggtttgtttcacccggcccggaaagtcagagacgtgtactgg
aaaatttacaactccatctacattggttcacaggatgctctcatagcacattacccaaga
atctacaatgatgataagaacacctatattcgttacgaacttgactatatcttataa
DBGET
integrated database retrieval system
