Hyaena hyaena (striped hyena): 120222644
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Entry
120222644 CDS
T07257
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120222644 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhv03041
]
120222644 (DHX16)
Enzymes [BR:
hhv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120222644 (DHX16)
Spliceosome [BR:
hhv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120222644 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
120222644 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
SecA_DEAD
Flavi_DEAD
nSTAND3
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
120222644
NCBI-ProteinID:
XP_039076472
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTARRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARVAEREARALLEKNRSYKLLEDSEESSEETVGRAGSSLQK
KRKKRKHLRKKHQDEEEEEEEEVSEKGKRKTGGSKQLTEKPESEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPEETRGQPARAMDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVL
EEEETIEFVRATQLQGDEEPSGPPPPTHAQQKESIQAVRRSLPVFPFRDELLAAIANHQV
LIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEV
GYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIK
DVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVV
SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA
RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA
SANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMH
FDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCS
EEILTVAAMLSVNNSIFYRPKDKVVHADNARINFFLPGGDHLVLLNVYTQWAESGYSSQW
CYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRS
GYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK
AKELEDPHSKKMPKKIGKTREELG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggctgggctggagcgctgggtgcaggacgagctgcactcggtgttgggg
ttgagcgagcggcacgtagcccagtttctaatcggtaccgctcggcgctgcgcctcggct
gaggagttcgtgcagcgcctccgagacaccgataccctggacctcagcgggccggcccgg
gacttcgccctgagactctggaacaaggtaccacggaaggcagtggtagaaaagccagct
cgagtggcagagagagaggctcgagccctgctagagaagaatcgatcctataagttgctg
gaagacagtgaggagagcagtgaggagactgtaggtagagctgggagcagtctccagaag
aagcgtaaaaaacggaaacacctccggaagaaacatcaggatgaggaggaagaagaagag
gaagaggtttctgagaaggggaagagaaagacaggggggagtaaacagctgactgagaag
ccagagtcggaggatgagtgggagcggactgagcgagaacgccttcaggaccttgaagaa
cgtgatgccttcgctgagagggttcggcagcgggacaaggaccggactcgcaatgtcctg
gagcggtcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggctgaggaa
gaccggaaagccatggtcccagagctgcggaagaaatcccgccgagagtacttggctaag
agggagcgagagaagcttgaggacctggaggctgagctggctgatgaggagttccttttt
ggggatgtggagctgagtcgacatgaacggcgggagctcaaatacaagcggcgagttcgt
gatttggcccgagagtatcgggcagctggggagcaggagaagctggaggccaccaatcgt
taccacatgcctgaggagactcgaggacagccagcacgagctatggatctcgtggaggag
gaatcaggtgcccctggggaagagcagcggcgctgggaggaggcccggctgggggcagcg
tccctgaaatttggggcccgagatgctgcctcccaggagcccaagtatcagctggtgcta
gaggaagaggagaccattgagtttgtccgggccactcagctccagggtgatgaggagcca
tcaggcccaccacctccaacccacgctcagcagaaggagtccatccaggctgtccgccgc
agcctcccagtgttcccgtttcgtgatgagctcttggctgctattgctaatcatcaggtc
ctcatcatcgagggtgagacaggctccgggaagaccacccagatcccacagtatctcttt
gaggagggttacacaaagaagggaatgaagattgcctgcacccagccccggagagtggca
gccatgagtgtggctgctcgagtggctcgggagatgggtgtgaagcttgggaatgaggtt
ggctacagcatccgctttgaggactgcacatcggagcgaactgttctccgctacatgaca
gatggaatgctcctccgggagttcctctctgaacctgaccttgcaagttacagcgtggtg
atggtagatgaggctcatgaacggactctacacacagacattctctttgggttgatcaag
gatgttgctcgcttccggcctgagctgaaggtcttggtggcttcagccacactggacact
gcccgtttttccaccttctttgatgatgcccctgtcttccgaatccctggacgcaggttt
ccagttgacatcttctataccaaggctccagaagctgactacctggaagcttgtgtagtg
tctgtgctgcagatccatgtgacccagcccccaggggatatcctggtgttcctgacagga
caggaggagattgaggccgcctgtgaaatgctccaggatcgctgccgccgcctgggctcc
aaaatccgggagctcttggtgttacccatttatgccaacctgccttctgacatgcaggct
cgaatctttcagcctacacctcctggggcacgaaaggtggttgtggcaacaaacatcgct
gagacatcactcaccattgagggcatcatttatgtgctggatccagggttctgtaagcag
aagagttacaaccctcgcacgggcatggaatccctcactgtcacaccctgcagcaaggcc
tcagccaatcaacgagctggtcgggcaggtcgggtggctgcaggaaagtgcttccgcctg
tatactgcctgggcctatcagcacgaactggaggaaaccacggtgccagagatccagagg
accagcttgggcaatgttgtgttactcctcaagagcttagggatccatgacctaatgcac
tttgatttcctggatcctccaccatatgagaccctactgctggcattggagcagctgtat
gctttgggagccctcaaccaccttggggagctcactacgtctggtcgaaagatggcagag
ctgccagtggatcccatgctatctaaaatgatcttggcctctgaaaagtatagctgttca
gaagagatcctgacagtggctgccatgctctctgtcaacaattccatcttctaccgaccc
aaggacaaggttgtccatgctgacaatgcccgtatcaactttttcctccctggtggggac
cacctggttcttctaaacgtttatacacagtgggctgagagtggttactcctcccagtgg
tgctatgaaaactttgtacagttcagatcaatgcgccgagcccgggatgtacgggaacag
ctggaggggctcttggaacgtgtggaagttggtctcagctcctgccaaggggactatatt
cgtgtacgcaaggccatcacagctggttacttttaccacacggcacgactgactcgtagt
ggctatcgcacagtcaaacaacagcagacagtgttcattcaccccaactcctccctcttt
gaggaacagccacgctggctgctctaccatgaacttgtcttgaccaccaaggaattcatg
agacaggtattggagattgaaagcagttggcttctggaggtggctccccactattataag
gccaaggagctagaagatccccattctaagaaaatgccaaaaaaaataggcaagacacga
gaagagctagggtaa
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integrated database retrieval system
