Hyaena hyaena (striped hyena): 120222682
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Entry
120222682 CDS
T07257
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120222682 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhv03400
]
120222682 (LIG3)
Enzymes [BR:
hhv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
120222682 (LIG3)
DNA repair and recombination proteins [BR:
hhv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
120222682 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
120222682
NCBI-ProteinID:
XP_039076539
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MTLAFKIFLPTLRALGRKELCLFREHHLWPDRRQFGHWSETELLHGHGLLQRRKPVLSSQ
KGSLRPRATCLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQH
IADLSSKATSTPKKKAVVQAKLTATGQVTSPVKGASLVTNTNPRKFSGFSAKPNNSGEAR
SSPTPKASLSSSRCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKEPGRRRALSVQASLMTP
VQPMLAEACKSIEHAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPGS
QKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFTV
ATGDEGSSTTGGSSGENEGTPGPAASREASRAAPKQPSTSAKKAGGRRSSPSSRGGNKPT
AKPPPMRVGEKRKAPDEPPCRAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQE
FDMASATHVLGSRDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcttcctcccaaccctccgcgcactcgggcgaaaagaactg
tgcctcttcagagaacatcatctctggcctgacaggagacagttcggccattggtcagaa
acagagctgcttcatgggcacggactcctccagagaagaaagcctgttctgtcatcccag
aaaggcagtctaagaccacgtgccacctgccttgttttcttgccagggtcgcatgtggga
ctctgcagtggcccctgtgagatggccgagcaacggttctgtgtggactatgccaagcgt
ggcacggccggctgcaaaaagtgcaaagaaaagattgtgaagggcgtatgccggatcggc
aaagtggtgcccaaccccttctcggagtccgggggcgatatgaaagagtggtatcacatt
aaatgcatgtttgagaaactggagcgggcccgggccaccacgaaaaaaattgaggacctc
accgagctggaaggctgggaggagctggaagataatgagaaggaacagataagccagcac
attgcagatttgtcttctaaggcaacaagcacaccaaagaagaaagctgttgtccaggct
aagctgacagccaccggccaggtgacctctccagtgaaaggtgcctcattggtcaccaat
accaatccccggaaattttctggtttttcagccaagcccaacaactctggggaagcccgc
tcaagccctacccctaaggcaagcctgtcctcaagcagatgtgaccccaagcacaaggat
tgtctgctgcgtgagtttcggaagttgtgtgccatggtggctgaaaatcctagctacaac
acaaagacccagatcatccaggacttccttcggaaaggttcagcaggagatggtttccac
ggtgacgtgtacctaacagtgaagctgctgctgccgggtgttattaagagtgtttacaac
ttgaacgataagcagattgtgaagcttttcagccgcatttttaactgcaacccagatgat
atggcacgagacctggagcagggtgacgtgtcagagacaatcagagtcttctttgagcag
agcaagtctttccctccagctgccaagagcctccttaccatccaagaggtagatgaattc
ctccttcagctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggacatc
gcatccaggtgtacagccaatgaccttaaatgcatcatcagattgatcaaacatgatctg
aagatgaactcaggcgcaaaacatgtgttagatgcccttgaccccaatgcctatgaagcc
ttcaaagcctcacgcaacctgcaggatgtggtggagcgagtcctccacaatgagcaggag
gtggaaaaggagccaggccggagacgagctctgagtgtccaggcttcactgatgacgcca
gtgcagcccatgctggctgaggcctgcaagtccatcgagcatgcgatgaagaagtgtcct
aacggcatgttctctgagatcaagtacgatggggagcgagtccaagtgcataagaatggg
gaccacttcagctacttcagccgcagcctcaagcctgtcctgcctcacaaggtggcccac
tttaaggactatatcccccaggcttttcctgggggccacagcatgatcttggactctgag
gtgctcctgattgacactaagacagggaaaccgctgccctttgggactcttggggtgcac
aagaaagctgccttccaggatgcgaacgtctgcctgtttgtgtttgattgtatctacttc
aatgatgtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcacgataac
atggttgaaattcccaaccggatcatgttctcagaaatgaagcaagtcactaaagcttca
gacttggccgacatgataaaccgggtcatccgagaggggttggaaggactggtgctgaag
gacgtgaagggtacctatgagcctggaaagcgacactggctgaaagtaaagaaagactat
ttgaacgagggggccatggctgacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtccatcttccttatgggctgctatgacccaggcagc
cagaagtggtgcacggtcaccaagtgttcaggaggacacgatgatgcgacgcttgcccgc
ctacaaaaggaactggacatggtgaagatcagcaaggatcctagcaagatacccagctgg
ctgaaaatcaacaagatctactatcctgacttcatagtcccagacccaaagaaagctgcc
gtgtgggagatcacaggggctgagttctccaaatctgaggctcacacggccgatgggatc
tccatccgattccctcgttgcacccggatccgtgatgataaggactggaaatctgctact
aacctcccccaactcaaggaactgtaccagctgtccaaggagagggcagacttcactgtg
gcgaccggagatgaggggagctccactactgggggcagcagcggagagaatgagggtacc
ccggggcctgctgcgtctcgtgaggcctccagggccgccccgaagcagccctccaccagt
gccaagaaggcaggagggaggcggagcagcccctccagccgaggcggcaacaagccaaca
gcgaagcctccccccatgagagtgggagagaagcggaaggctccggacgagcccccgtgc
cgtgcaaaggtgctgctggacatcttcactggggtacggctttacctgccaccctccact
ccagacttcagccgtctcagacgctactttgtggcattcgatggggacctggtgcaggaa
tttgacatggcctcagccacacatgtgctggggagcagggacaagaaccctgaggctcag
caggtctcccctgagtggatctgggcgtgtatccggaaacggaggctggtagctccctgc
tag
DBGET
integrated database retrieval system
