Hyaena hyaena (striped hyena): 120223337
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Entry
120223337 CDS
T07257
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120223337 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhv03019
]
120223337 (PNLDC1)
Enzymes [BR:
hhv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
120223337 (PNLDC1)
Messenger RNA biogenesis [BR:
hhv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120223337 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
120223337
NCBI-ProteinID:
XP_039077332
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDVGADEFEQSLPLLQELVLGAEFVGLDIEFTGLRSNLSRPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGVLDSEFSFQASSVQFLNQYGF
DYNKFLKNGIPYMNEEQEKKIKHNILTGNWRIRSSLDKDQIKVVIDEVTRWLDLAQEGDW
MTLPGIAGFQAFEIQLVLRQALPDIWTVLRDQGIIVKKVSKQHRWYLENTSCDRESCWKE
KILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKLNIHNLFPV
LIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSDLNPTKNSGPVIIHASKCEKYAETKYPH
EAAYDAFLCGSVLLKVAHLLLWRVRGAGSLPEPSFPLYLDVLAPYVNQVNLIRAGVPKIN
FSGPDYPSIRPPILLLSVRRWPGVSEQQVYREFQNLCKFDVRRLSRSQFLLLTNKFKDAR
SILREYRAHPTLQVSLYRYWRHSPNINCLLQVCGVVATWALLALVLGRPDP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgagcagagcctccctctgctgcaggagctcgtcctg
ggcgccgagttcgtgggtctggacatagagttcacaggccttcggtctaatctgtcccgg
ccccagcagatcagcctgttcgatttgccctccgagtggtatctaaagacccggcagagt
gttcagcagttcacaatctgtcagataggattgtccgtgttctccagtattgaaggagag
tctaacaagtatgtagcccactcgtgtaacttctttctcttccctacgacgtttggggtt
ttggattcagagttctctttccaggcttccagcgtccagtttctgaatcaatatggcttc
gactacaacaagtttctcaaaaatgggatcccatatatgaatgaggaacaggagaagaaa
atcaaacacaacatcctgactgggaactggagaattcgcagttctctggataaagaccag
atcaaggtggtgattgatgaggtgacccggtggctggacctggcacaggagggtgactgg
atgactctccctgggattgctggcttccaggcctttgagatccagctggtgctgaggcag
gccctccctgacatctggacggtcctgagagaccaggggataatagtgaaaaaagtgagt
aagcagcatcgctggtatcttgagaacacctcctgtgatcgagagagctgttggaaggag
aagattcttctctctgcgaggggtttttctgtgtttttccagatgctggtgaaagcccag
aagcccttagtgggccacaacatgatgatggacttgctgcatctgcacgagaagttcttc
cggccgctcccagaaagctatgatcaatttaagctgaatatccacaacctatttcctgtt
ctcattgacaccaagaatgtgacgaaggacatctggaaggaactgaatttcccaagggtt
tcaaatctttcggaagtctatgaagtcctaaatagtgacttgaatcctaccaagaattct
gggccagtgattattcacgcaagcaagtgcgaaaaatacgctgagaccaagtacccacac
gaggctgcgtacgacgctttcctctgtggctcagttcttttgaaagtggcacatctgctc
ctgtggagagtacgtggagcgggctccctgcctgagccgtccttccctctgtacctcgat
gtgctggccccctacgtgaaccaggtgaatcttatccgagccggggtccctaagattaac
ttttctggtcccgactaccccagtatccggcctcccatcctcctcctcagcgtccggagg
tggcctggggtcagcgagcagcaagtctatcgtgagtttcagaatctctgcaagtttgac
gtccggcgactctcacggagccagtttctgctcttgaccaataagttcaaggacgcgcgg
agcatcctgagggagtaccgggcccaccccacgctgcaggtctccctgtaccgctactgg
aggcactccccgaacatcaactgcttgttacaagtgtgcggcgtggtggccacctgggcg
ctcctggctcttgtcctcggacgacctgacccctga
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