Hyaena hyaena (striped hyena): 120223627
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Entry
120223627 CDS
T07257
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120223627 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhv01009
]
120223627 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhv04515
]
120223627 (PCDH20)
Protein phosphatases and associated proteins [BR:
hhv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120223627 (PCDH20)
Cell adhesion molecules [BR:
hhv04515
]
Cadherins
Protocadherins
120223627 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
120223627
NCBI-ProteinID:
XP_039077747
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MRGRGSARGSRAPAVRRRPAPWHPRPDMGRPRRPRSSTSHRSLPHLLLFFLFVGPFSCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAGRRDPRPQLPEGARAERNPPLSFSL
ASRGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAAWGGSISVSSSPSSDSCLLLL
DVLVLPQEYFRFVKVKIAIRDVNDNAPQFPVSQISVWVPENAPVNTRLAIEHPAMDPDVG
TNGVQTYRLLDYHRVFTLDVEENENGERTPYLIVMGLLDRETQDQYLSIIVAEDGGSPPL
LGSATLTIGITDINDNCPLFTDSQINVTVFGNATVGTPVAAVQAVDRDLGTNAQITYSYS
QKVPQASRDLFHLDETTGVIKLFSKIGGSVLETHKLTILANGPGCIPAVTTALVTIIKVI
FRPPEIVPRYIANEVDGIVYLKELEPVNTPIAFFTIRDPEGKYKVSCYLDGEGPFRLSPY
KPYSNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKKIIKVQLLDDNDNAPIFLQPLL
ELTIEENNAPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDSGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKASLDREQQSSYTLWVEAVDGGEP
ALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINVEEKEPQISIEPTHRKVESVSCVPTLVALSVISLGS
ITLVTGMGIYICLRRGKKHHRQDENLEVQIPLKGKIDLHMRERKPVAISNI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgggggagcgcgcgcggctcgcgggccccggcggtgaggcggcgcccggcg
ccctggcacccgcgcccggacatggggcgcccgcgtcgtccccggagcagcaccagccac
agaagcctgccgcatctccttctgtttttcctcttcgtgggacccttcagctgcctggcg
agctacagccgggccacggagcttctgtacagcctgaacgagggcctgccggcgggggtg
ctcatcggcagcctggccgaggacctgcggctggtgccccgcgccgggcggcgggacccg
cggccgcagctgccagaaggcgccagagctgagcggaacccccctctctccttcagcctg
gcctcccgcggactgagtggccagtacgtgaccctggacaaccgctccggggagctgcac
acctctgcccaggagatcgaccgggaggccctgtgtctagaaggaggtggaggagcggcc
tggggcggcagcatttccgtctcctcctccccttcctccgactcttgtcttctgcttctg
gatgttctggtcctgcctcaggagtacttcaggtttgtgaaggttaaaatcgcaatccgg
gacgttaatgacaatgccccgcagttccccgtttcccagatctcagtttgggtaccagaa
aacgcacctgtcaacacccggctggccatagagcatcctgccatggacccagatgtaggc
acgaatggggtgcagacctaccgtttgctggactaccaccgcgtgttcaccctggacgtg
gaggagaatgagaacggggagcgcaccccctacctcattgtcatgggacttttggacagg
gagacccaggaccagtatctgagcatcatcgtagcagaggacggcgggtccccaccactg
ctgggcagcgccaccctcaccatcggcataactgacattaacgacaactgccctctcttc
acagactcgcaaatcaatgtcaccgtctttgggaatgccaccgtgggcacaccggttgca
gctgtccaggctgtggacagagacttgggaaccaatgctcagatcacttactcgtacagc
cagaaagtcccacaagcatccagggatttattccatctggatgaaaccaccggagtcatt
aagcttttcagtaagatcgggggaagtgttctggaaacgcacaagctcaccatccttgcc
aatgggccaggctgcatcccggctgtgaccacggccctcgtgaccattatcaaagtcatt
ttcagaccacctgaaatcgttcctcgttatatagcaaatgaggtagatggtatcgtttac
ctgaaagaactggagccggttaacactccgatcgcattcttcaccataagagatccagaa
ggtaaatacaaagtgagctgctacctggacggtgaagggccattcaggttatcaccttac
aaaccgtacagtaatgagtatttgctggaaaccacaaagcctatggactatgagctacag
cagttctatgaaatagctgtggtggcctggaactctgagggatttcacgtcaaaaaaatt
attaaagtgcaacttttagacgacaacgacaatgctcccatcttcctccagcccttgctg
gaactcactattgaagaaaacaatgcccccaatgcctttttgactaagctgtacgctaca
gatgctgacagcggagagagaggccaagtttcctattttctgggacctgatgccccatcg
tatttttccttagacagcgtcacagggatcctgacagtttctactcagctggaccgagaa
gagaaagaaaagtacaggtacacagtcagagctgttgactctgggaagccgcccagagaa
tcagtagccacagtggctctcacggtgttggataaaaatgacaacagccctagatttatc
aacaaggacttcagcttttttgtgccagaaaactttccaggatatggtgaaattggggtc
atcagtgtaacagatgctgacgccggacgaaatggatgggtcgccctctcggtggtgaac
cagagtgatatttttgtcatagacacaggaaagggcatgctgagagccaaagcctctttg
gacagagagcagcaaagctcctatactctgtgggttgaagctgttgacgggggtgagcct
gccctctcctcgactgcaaaaatcacaattctccttctagatatcaatgacaaccctcct
ctcgttctgttccctcagtcgaacatgtcctacctgttggtactgccgtccactctccct
ggctccccagtcacggaggtctatgctgttgacaaagacacaggcatgaatgctgtcata
gcttacagcatcataggaagaagaggtcctaggcccgagtcctttaggattgaccctaaa
actggcaacattactttggaagaggcattgctgcagacagattacggactccatcgttta
ctggtgaaagtgagcgatcatggttatcctgaacctctccactccacggtcatggtgaac
ctatttgtcaatgacactgtcagtaatgagagctacattgagagtcttttaagaaaggaa
ccagaaattaatgtagaggagaaagaaccacagatctcaatagaaccaactcacaggaaa
gttgagtctgtgtcctgtgtgcccaccttagtggctctgtctgtaataagcttgggttct
atcacacttgtaacagggatgggcatttacatctgtttaaggagagggaaaaagcatcac
aggcaagacgaaaatctggaagtacaaattccactcaaaggaaaaattgacttgcatatg
agagagaggaaaccagtggctatttctaatatttga
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