Hyaena hyaena (striped hyena): 120224607
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Entry
120224607 CDS
T07257
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hhv
Hyaena hyaena (striped hyena)
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhv03021
]
120224607 (CHD1)
03036 Chromosome and associated proteins [BR:
hhv03036
]
120224607 (CHD1)
Transcription machinery [BR:
hhv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120224607 (CHD1)
Chromosome and associated proteins [BR:
hhv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
120224607 (CHD1)
SLIK complex
120224607 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
120224607
NCBI-ProteinID:
XP_039078799
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSPSGSGSGSSSGSSSDGSSSQSGSSDSESGSESGS
QSESESDTSRKNKVQAKSPKVDGAEFWKSSPSIMAVQRSAMLKKQQQQHQASSNSGSEED
SSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYEPK
NKVKSRKPQNRSKAKNGKKILGQKKRQLDSSEEDDDEEDYDNDKRSSRRQATVNVSYKED
EEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDPNA
GFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKN
ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWED
GALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPLYIGGHESLELRDYQ
LNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW
QREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGG
LNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
SSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQY
YKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIR
SSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK
QVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEEL
SAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFS
NMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGS
EGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRETIKGFSDAEIRRFIKSYKKFGGPL
ERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGIERTGGRLGKVKGPTFRIS
GVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGI
YEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRL
SGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDDDDDKDEITSVKHPNKKIK
TERDSEERPEPNVFIKKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKV
KEAIQKEKDIKEEKLSESKSDSKERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFS
ICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWR
KNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNAQVIRNPDVERLKENTN
HDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQES
RYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRASSEYTHHKSS
RDYRYHSDWQMDHRATSSGPRSPLDQRSPYGSRSPFEHSVEHKSTPEHTWSSRKT
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcaccttcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgaatctggatctgaatcgggcagt
cagtcagagtctgagtcagacacttcccgaaaaaacaaagtccaagcaaaatcaccgaaa
gttgatggagctgagttttggaaatctagccctagtattatggctgttcaaagatctgca
atgctcaagaagcagcagcagcagcatcaagcttcatctaatagtggatcagaagaggat
tcttctagcagtgaagattctgatgactcatcaaatgaagtcaaaaggaaaaaacataaa
gatgaagattggcaaatgtctgggtcaggatctccatctcagtctggttcagattcagaa
tctgaggaagaaagagataaaagcagttgtgatgaaacagaatctgattatgagccaaaa
aacaaagttaaaagcagaaaacctcaaaatagatctaaggcaaaaaatggaaagaaaatt
cttggacaaaaaaagagacagcttgattcatctgaggaggatgatgatgaagaagattat
gataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagctataaagaagat
gaagaaatgaaaacagattctgatgacctactggaagtctgtggagaggatgttcctcaa
cctgaggaagaggaatttgaaacgatagaacgttttatggattgtcggattgggagaaaa
ggagctactggtgctactacaaccatctatgcagttgaagcagatggtgacccaaatgca
ggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatggaaaggatgg
tcccatatccacaatacgtgggagacagaagaaacccttaagcagcagaatgttagagga
atgaaaaaattggataattataagaaaaaagatcaggaaacaaaaagatggttgaaaaat
gcttctccagaagatgtagaatattataattgccagcaagaacttacagatgatctacac
aaacagtatcaaatagtggaacgaataattgctcattccaatcaaaagtcagcagctggt
tatcctgattattattgcaaatggcagggccttccatactcagagtgcagctgggaggat
ggagctctgatttccaagaagtttcaagcatgcatagatgagtattttagcaggaatcag
tcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaagatttgtagcc
ctaaagaaacagccattgtatattggaggacacgagagtttagaattaagagattatcag
ctgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgcatacttgct
gatgaaatgggccttggaaaaacaatacagacgatctcctttctgaactatttgtttcat
gaacatcaattatatggaccttttctattagtagtaccactctccactcttacttcctgg
caaagggaaattcagacatgggcttctcagatgaatgctgtggtttatttaggtgacatt
aacagcagaaatatgataagaactcacgaatggatgcatccccagaccaaacggttaaaa
tttaatatacttttaacaacttatgaaattttattgaaggataaggcattccttggaggt
ctgaattgggcgtttataggtgtagatgaagcacatcgattaaagaatgatgactctctt
ctgtataaaactttaatagactttaagtccaatcaccgtctccttattactggaactcct
ctacaaaactcccttaaagagctgtggtctttgctacatttcattatgccagaaaagttt
tcttcctgggaagattttgaagaagaacatggaaaaggcagagaatatggttatgcaagc
ctccacaaggagcttgagccgtttctgttacgcagagttaaaaaagatgtggaaaaatct
cttcctgccaaggttgaacagattttaagaatggaaatgagtgctttacagaaacagtat
tacaaatggatattaactaggaattacaaagccctcagcaaaggttccaagggcagtacc
tcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgctacctcatt
aaaccaccagataataatgaattctataataaacaggaggccttacaacacttaatccgt
agtagcggaaaattgattctccttgacaaactgttaattcgcctaagagaacgaggcaat
agagttcttatattttcccaaatggtgcggatgttagatatactcgcagaatatttgaaa
taccgtcagttcccctttcaaagattagatggatcaataaaaggagagctgagaaagcaa
gctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttccacgaga
gctggaggtctaggaattaatttagcctctgctgacactgttgttatatttgattctgat
tggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcagaagaaa
caggtgaatatttaccgtctagttacaaagggatccgttgaagaggatattcttgaaagg
gccaaaaagaagatggttttagatcatcttgtgattcagagaatggacacaactgggaag
acagtactacatacaggttctgcgccctcaagttctactcctttcaataaagaagaatta
tcagccattttaaagtttggtgctgaggaactttttaaggaacctgaaggagaagaacaa
gagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcatgaaaatgaa
ccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgctaacttttca
aatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaattgggaagaa
ataattcctgaagatcaaagaagacgattagaagaggaagaaagacaaaaggaacttgaa
gaaatttatatgctcccaagaatgagaaactgtgcaaaacagattagttttaatggaagt
gaagggaggcgcagtagaagtaggagatactctggatctgatagtgactcgatctcagaa
aggaaaaggccaaagaaacgtggaagaccacggactatccctcgggagactatcaaagga
tttagtgatgcagaaattcggcggtttatcaagagttacaagaagtttggtggccctttg
gaaaggttagatgcaattgcacgggatgctgaattagttgataagtcagagaccgacctc
agacgactaggggaattggtacataacggttgcattaaagctttaaaggataattcttca
ggaatagaacgaacaggtggtagacttggaaaagtgaagggtccaacattccgaatatca
ggagtacaggttaatgctaagctcgtcatctcccatgaagaggaattgataccattgcat
aaatccattccttcagatccagaagaaagaaagcagtatactatcccatgccacacaaag
gcagctcattttgatatagactggggcaaagaagatgattctaatttgttaattggtatc
tacgaatacggatatggaagctgggaaatgattaaaatggatcctgacctcagtctaaca
cacaagattcttccagatgatcctgataaaaaaccacaagcaaagcagttgcagacacgt
gcagactacctcatcaaactacttagtaaagatcttgcaagaaaagaagctcagagactt
tctggggcaggaggctcaaagaggagaaaagcaagagctaagaagaataaagcaatgaag
tctataaaagtgaaagaagaaataaagagtgattcttcacccctgccatcagagaagtct
gatgatgatgatgataaggatgagatcacttctgtgaaacatccaaataaaaaaattaaa
acagaaagagacagtgaagaaagacctgagccaaatgtttttataaagaaggaatcagaa
gaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagggagataaaagaa
aaagaggataagaaagatataaaggaaaaagattttaaagagaaaagagaaaacaaagta
aaagaagctatacagaaagaaaaagacataaaggaagaaaagttaagtgaatccaagtct
gatagcaaggaaagatccaagaaatcttcagtgtcagacgctccagttcatatcactgca
agtggtgaaccagttcccatatctgaagaatctgaagagctggatcagaaaacattcagc
atttgtaaagaaagaatgaggcctgtcaaagcagctttgaaacaacttgataggcctgaa
aaaggcctttcagaaagagaacaactggagcatactagacagtgtttaataaaaattgga
gaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatcaagcagtggaga
aaaaacctgtggatttttgtatctaagtttacggagtttgatgcaagaaaattacataaa
ttatataagcatgctattaaaaaacggcaggaatctcagcaaaataatgaccagaacagc
aacttgaatgctcaagtgattagaaatccagatgtggaaagattaaaggagaatacaaac
cacgatgatagcagcagggacagttattcatctgatagacacttatctcagtatcatgat
catcataaagaccgacatcagggagattcttacaaaaagagtgactctaggaaaagaccc
tattcttcttttagtaatggtaaagatcatcgtgactgggatcattacaagcaagaaagc
aggtattacagcgatagagagaaacacagaaaactggatgatcacaggagtagagatcac
aggtcaaatttggaaggaagtttaaaggacagatctcattctgatcatcgttctcattca
gaccatcggttacattcagaccatcgggcaagttctgaatatacacaccataaatcttcc
agggattataggtatcactcagattggcagatggaccacagagctaccagtagtggcccc
agatcaccactagatcagaggtctccttatggctccagatctccatttgaacactcagtt
gaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
