Hyaena hyaena (striped hyena): 120228272
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Entry
120228272 CDS
T07257
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv04064
NF-kappa B signaling pathway
hhv04622
RIG-I-like receptor signaling pathway
hhv05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
120228272
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120228272
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120228272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhv04121
]
120228272
Enzymes [BR:
hhv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120228272
Ubiquitin system [BR:
hhv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120228272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
EGF_integrin
zf-Tbcl_FmdE
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120228272
NCBI-ProteinID:
XP_039082497
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MQKVSRPVQDHSPAPQPPAQPSRPSQAQLLMSNSSLHTCEDQVLCPICLEVFRNPVTTAC
GHNFCMTCLQGFWDHLATTGETLYCPQCRESFPSRPRLCKNVILEEMVTCFIQVKGQALG
PSRTLAGPRDVPCDFCSPQKLKSVKSCLQCMASLCEKHLSSHFEDQMFQDHQLLEPVWDL
KSRLCRKHRKLRRLYCRTEGSCVCGACLLEEHKNHDTIPLEEERARKEVEVRKVQASVEN
QMLIINSDSQRHRGQVAFLSKLIQTTRDEVNACFSEIIQEVKQLQMKVLDFVEKEEAAAL
GKLGSSIQQSHNRLLKLEGDSIWLRTLLANKSDQQFLQEFPRLKHFPACSEPLMGTNCEE
KQSFLQLPETLAELRTRLMDVGLSFINQFLLKGDAASWNPKPLSERTLGCKSVLSKAPPS
PPGIKMNSYELLPSAVDRKTLLKCYCNLNFDPTTASEELFLFKETHSVLNLGILLEPFAA
GGPFPGFKQWPQVLCSRGLSEGRHYWEAEVSNSWVCLGLTYRRSPPLRGRPRRNIVYLLG
RNPYSWCLEWDSLKFSVWHNNTQTVLHGGYHRTLGVALDCGAGCLSFYGVAGGASLLYRF
LASFLEPLYPAVMVSSGASVTLKQRPEAEA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagtttcacggccagtccaggaccacagcccagccccgcagcccccggcccag
ccctcaagaccttcccaggctcagctcctgatgagtaacagcagtctccacacatgtgag
gaccaagtcctctgtcccatctgcctggaggtgttccgcaacccggtcaccaccgcctgc
gggcacaacttctgcatgacctgcctccaaggtttctgggaccacctggctaccacaggc
gagaccctgtactgcccccagtgccgggagagcttcccctccaggccacgcctctgcaag
aatgtcatcctggaggagatggtgacctgcttcatccaggtcaagggtcaggccttgggg
ccctcacggaccctggccgggcccagggacgtgccctgcgacttctgctccccccagaag
ctcaagtcagtcaagtcgtgtctgcagtgcatggcctccctgtgcgagaagcacctgagc
agccacttcgaggaccagatgttccaggaccaccagctgctggagcccgtgtgggatctg
aagagccgcctgtgccggaagcaccgcaagctgcggcggctgtactgccgcacggaaggc
agctgcgtgtgcggggcctgcctgctggaggaacacaagaaccacgacaccatccccttg
gaggaggagcgcgcccggaaggaggtggaggttcggaaggtccaggccagtgtggaaaac
cagatgctgatcatcaactctgacagccagaggcaccgggggcaggtggcctttctctcg
aaattgatccagacaacacgcgatgaggtgaatgcctgcttctcagagatcatccaggag
gtcaaacagctgcagatgaaggtcttggattttgtcgagaaagaggaggcagccgctctg
gggaagctgggcagctccatccagcagagccacaaccggctcctgaagctagaaggggac
agcatctggcttcgcaccctgctcgccaacaagagtgaccagcaatttctgcaggagttc
cccaggctgaagcactttcctgcctgctcggaacccctgatgggcaccaactgcgaggag
aagcagagcttcctccagttgccagagaccctggcggagctccggacacggctgatggac
gtgggtctcagcttcatcaatcagttccttctgaagggtgatgcagcctcctggaatccc
aagcccctctcggaaaggacgctgggctgtaagagtgtcctcagcaaagcccctccatct
cccccaggcattaagatgaactcctatgaattgctgccctcagctgtggacaggaaaaca
cttctcaagtgttactgcaacctgaacttcgaccccaccacagccagcgaggagctgttc
ctgtttaaggagacccactcggtgctgaacctgggcatccttctggagcccttcgccgcg
ggcggccccttccccggcttcaagcagtggccgcaggtgctgtgctcgcgcggcctgtcc
gagggccgccactactgggaggccgaggtgtccaactcgtgggtgtgcctgggcctcacc
taccgccgcagccccccgctccgcggccgcccgcgccgcaacatcgtctacctgctgggc
cgcaacccgtactcgtggtgcctggagtgggactcgctcaagttctccgtgtggcacaac
aacacgcagacggtgctgcacggcggctaccaccgcacgctcggcgtggcgctcgactgc
ggcgccggctgcctctccttctacggcgtggccggcggcgcgagcctgctctaccgcttc
ctcgcctccttcctggagcctctctaccccgcggtcatggtcagcagcggcgcctcggtc
acgctcaagcagcgccccgaggcggaggcctag
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