Hyaena hyaena (striped hyena): 120228542
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Entry
120228542 CDS
T07257
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03030
DNA replication
hhv03410
Base excision repair
hhv03420
Nucleotide excision repair
hhv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120228542 (RFC1)
03410 Base excision repair
120228542 (RFC1)
03420 Nucleotide excision repair
120228542 (RFC1)
03430 Mismatch repair
120228542 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhv03032
]
120228542 (RFC1)
03400 DNA repair and recombination proteins [BR:
hhv03400
]
120228542 (RFC1)
DNA replication proteins [BR:
hhv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120228542 (RFC1)
DNA repair and recombination proteins [BR:
hhv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120228542 (RFC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
Rad17
AAA_5
AAA_14
RuvB_N
AAA_17
AAA_33
AAA_30
AAA_16
AAA_18
AAA_7
Zeta_toxin
nSTAND3
RNA_helicase
AAA_19
NPHP3_N
AAA_28
SKI
Motif
Other DBs
NCBI-GeneID:
120228542
NCBI-ProteinID:
XP_039082947
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVTDTVKKNEKTKSAEETVKAKKGIKEIKVNSSCKEDNSKQKQTN
KKKRIIYDSDSESEETVQVKNAKKQPEKPKPGKILRQDPVTYISETDEDDDFVCKKAASK
SKENGRSTNSYLGASNKKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKKMVAS
KRKEPSQNVDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKKTRKD
PEERETLSSVQANLSKAEKHKSPHKVKTEQFSDDRKNCSPKKQTKCESLKGPQQYLKSSP
HKIGETSPKASSKLALLKKKEESSYKETEPMASKRKENAIELKGQTKTPQTKTPKKPKRS
PAKKESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLES
IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIR
TMPGKKSKYEIAVEAEMKKEKSKLERTPKKNDQGKRKISPTKKESGSKKSRVTPKRDSST
KSIQKETSAIWRCLDFEEQVAEETNGDSRARNLADDSSENKVENLLWVDKYKPTSLKTII
GQQGDQSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTT
TASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSITGFYSSGAAHSVSTKHALIM
DEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQ
IKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHR
AKKDIRLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVKPVAAGG
DMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTF
PSWLGKYSSAGKHDRIVQDLALHMGLRTYSSKRTVNMDYLSHIRDALVQPLISQGVEGVQ
DVIALMDTYYLMKEDFENIMEISSWGGKPSLFSKLDPKVKAAFTRTYNKEVHLTPYSLQA
VKTPRHSTGPALDSEYNEELNEDDSQSDEKDQESMETDAMIKKKTKSSKPSKSEKDKESR
KGKGKSSKK
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacttgtgactgacaca
gtgaagaagaatgagaagacaaagtctgctgaagaaactgtaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagacaactctaaacagaagcaaacaaac
aagaaaaagaggattatctatgattcagattcagaatccgaggagacagtgcaggtaaag
aatgccaaaaagcaaccagaaaaacctaaacctggtaaaattctacgccaggatcctgtt
acatacatttcagaaacagatgaagatgacgactttgtttgtaagaaggcagcctctaaa
tcaaaagagaatggaagatctacaaatagttatcttggagcatcaaataagaaaaagaat
gaagaaaacactaagaccaagaataagcctttgtcaccaataaaacttacccccacatca
gtgcttgattattttggaactggaagtgtccaacgatcagataagaagatggtagcaagc
aaaagaaaagagccttcgcaaaatgtggatgattccagattaaatgatgaagccatcgcc
aagcagttgcaacttgatgaggatgcagagctggagcgacagctgcatgaagatgaagag
tttgccagaacattagccatgttggacgaagaaccaaagaccaaaaagactcgaaaggac
ccagaagaaagagaaacattgtcatctgtccaagccaatttaagtaaagcagaaaaacat
aaatctcctcataaagtaaaaacagaacaattttcagatgacagaaagaactgtagtcct
aagaagcaaactaaatgtgaaagtttgaaaggacctcagcaatatttgaagtcctcgcct
cacaaaataggagaaacttctccaaaagccagttccaagttggcccttttgaaaaaaaaa
gaagagagttcttataaagaaacagaacctatggcttcaaaaagaaaagaaaatgccatt
gaattgaaaggacagacaaaaactcctcagacaaaaactcctaagaaacccaaacgttct
ccagctaaaaaagagtctataagtcctgaagattctgaaaagagacgcactaattatcaa
gcttatcgaagctacttaaatcgagaaggtcccaaagctttgggctccaaagaaatacca
aagggagctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtcc
attgaacgagatgaggccaagtctttaattgagcgctacgggggaaaagtaacaggaaat
gtcagcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgat
aaggcagcagctttggggacaaatattattgatgaagatggtctattgaatctgattcga
actatgccaggcaagaagtccaaatatgaaattgcagttgaagctgagatgaagaaagaa
aagtccaaattggaaagaacacccaaaaaaaatgaccaaggaaaaagaaaaattagccca
actaagaaggaatcaggatctaaaaaaagcagagtgactcccaaaagggacagctctaca
aagtcaatacaaaaggaaacaagtgcgatttggagatgcctggacttcgaggagcaggtg
gctgaggagacaaatggcgacagccgggctaggaatttggctgatgacagcagtgagaac
aaagtggaaaatttgctctgggtggataaatataagccaacctcacttaagaccataatc
ggacagcaaggtgaccagagctgtgccaacaaactcctacgctggctccaaaactggcat
aagagtccatccgaagataagaaacacgcagcaaagtttggtaagtttgctggcaaagat
gatggctctagtttcaaagcggcactgctctctggccctccaggtgtgggcaagacaacc
acagcgtctctggtttgtcaggaattaggatatagctacgtggaactgaatgcaagtgac
actcggagtaagaacagtttgaaggagattgttgctgaatcactgaataataccagcatc
acgggcttttattcaagtggagctgcccattcagtaagcacgaaacatgctctcatcatg
gatgaagtagatggcatggcaggaaatgaggacaggggaggaattcaggaattaattggt
ctgataaaacatacaaaaattcccattatttgtatgtgcaatgatagaaatcatcccaag
attcgttctttggttcattattgttttgatcttcgttttcaaagacctcgagttgaacag
attaagggtgctatgatgtctattgcatttaaagagggtttaaagattccccctccagct
atgaatgaaataattttgggagccaatcaagatatcagacaggttttacacaatctgagt
atgtggtgtgcacgaagtaaggcactaacctatgaccaggccaaggctgattctcacaga
gcaaaaaaggatatcagactgggcccatttgatgttgcccggaaagtgtttgcagctgga
gaggagactgctcatatgtcgcttatggacaagtcagatctctttttccatgattattca
atagcacccctctttgtccaggagaactacgtacatgtgaagcctgtagctgcagggggt
gacatgaaaaagcatttgatgcttttaagcagagcagcagatagcatatgtgatggtgac
ctagtggaccgccagatccggagtaagcaaaactggagtcttttgcccacgcaggccatt
tatgccagtgttcttcctggagagttaatgagggggtacatgacccagtttcctaccttc
ccaagctggttggggaagtactcttctgccggcaaacatgatcgtattgtacaggaccta
gcactgcacatgggtctcagaacttactccagcaaaaggactgtaaacatggattatctg
tcacatataagggatgcacttgtacagcccttgatctcccaaggggtagaaggagtacag
gacgttatcgctcttatggacacatactatttgatgaaagaagactttgagaatatcatg
gaaattagcagctggggaggcaaacctagtctcttctccaagctggatcccaaggtgaaa
gcagccttcacaagaacttataataaggaagtgcaccttactccatattcacttcaggca
gtgaagacacccagacacagcacaggcccagcactggattctgaatacaacgaagagtta
aatgaagatgactctcaatctgatgagaaagaccaagagtctatggaaactgatgcaatg
atcaagaaaaagacaaaatcttcaaagccttcaaaatcagaaaaagataaggagtccaga
aaaggaaaaggaaaaagttcaaagaaatga
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integrated database retrieval system
