Hyaena hyaena (striped hyena): 120229418
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Entry
120229418 CDS
T07257
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv04064
NF-kappa B signaling pathway
hhv04514
Cell adhesion molecules
hhv04668
TNF signaling pathway
hhv04670
Leukocyte transendothelial migration
hhv04933
AGE-RAGE signaling pathway in diabetic complications
hhv05143
African trypanosomiasis
hhv05144
Malaria
hhv05417
Lipid and atherosclerosis
hhv05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
120229418 (VCAM1)
04668 TNF signaling pathway
120229418 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120229418 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
120229418 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
120229418 (VCAM1)
05143 African trypanosomiasis
120229418 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
120229418 (VCAM1)
05418 Fluid shear stress and atherosclerosis
120229418 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
120229418 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hhv04090
]
120229418 (VCAM1)
04091 Lectins [BR:
hhv04091
]
120229418 (VCAM1)
CD molecules [BR:
hhv04090
]
Proteins
120229418 (VCAM1)
Lectins [BR:
hhv04091
]
I-type lectins (Siglecs)
120229418 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
ICAM_N
Ig_4
Ig_6
Ig_5
C1-set
ICAM1_3_5_D2
Adhes-Ig_like
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
120229418
NCBI-ProteinID:
XP_039084348
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MFSSQRQLKTPRKMVVIFGASNILWMVFTVSQAFKIETFPEDKIVAQIGDAISLTCSTTG
CKHPSFSWRTHLDSPLNGQVRSEGTSSTLTMDPVGFRNEYSYLCTAICGSEKRERGIQVE
IYSFPKDPEIHLSGPLEAGKPVTVTCLVPDVYPFDRLEMSLLKGNDLLQNKDFVEPMERR
SLETKSLEVTFTPTNEDTGKALVCRAELHMDEIDFKPKERETTKKLQVYISPKNTVISVS
PSTRLQEGGSVTMTCSSEGLPAPQIFWSKKLDNGNLQPLSGNSTLTLIAMRMEDSGIYVC
EGVNQVGKNGKEVELIVEEKPFTVEISPGPQIVAQIGDSVVLTCGVTDCETPSFTWRTQI
DSPLSGTVKTEGSKSTLTLSPVSFENEHSYLCTVTCGRKKVEKGIKVDLYSFPRDPEIEM
SGLLVSGNPVTVSCQVPNVYPSDLLEIELLKGESVIENKNFLQDMDKKSLETKSLEMTFI
PTTEDMGEVLVCLAKLHIDEMEFEPKQRQSTQTLYVNVAPRDTTVLVSPSSILEEGSSVN
MTCSSNGLPAPKILWSRQLNNGHLQPLSENSTLTLTSTKMEDSGIYVCEGVNQAGISRKE
VELIIQVAPKDIQLTAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLQSRDG
AYTIHKVQLEDAGVYECESKNEVGLQLRSLTLDVKGRGKYQDYFSPELLVLYCASSLIIP
AIGMIIYFARRANMKGSYSLVEAQKSKV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatcacagcggcaactgaaaacgcctagaaagatggtcgtgatctttggagct
tcaaatatactttggatggtgtttacagtttctcaagcttttaaaatagagacgttccct
gaagacaaaattgttgctcagattggtgatgccatttcactgacttgcagtactacgggc
tgtaagcacccatctttctcttggagaacccatttagacagtccgctgaatgggcaggtg
agaagtgaggggacaagttccacgctgaccatggatcccgttggtttcaggaatgaatac
tcttacctgtgcacagcaatttgcggatctgagaaacgggaaagaggaattcaggtggag
atttactctttccctaaggacccggagatccatctgagtggccccttggaagctgggaag
ccagtcacagtcacgtgcctggttcctgatgtttatccatttgacaggctggagatgagt
ttgctgaaaggcaatgatctcctacagaataaggactttgtagaacctatggagaggagg
tccctggagaccaagagtttggaagtaaccttcaccccaaccaatgaagatactgggaaa
gctcttgtttgccgagcggaattacacatggatgaaattgactttaagcccaaagaaagg
gagactacaaaaaaactgcaagtctacatctcacccaagaacacagttatctctgtgagc
ccatccacaaggctgcaggaaggtggttctgtgacaatgacatgttccagtgaaggtcta
ccagctccgcagattttctggagcaagaaattagataatggaaatctacagcccctttct
gggaattcaactctcactttaattgctatgaggatggaagattctggaatttatgtgtgt
gaaggagtcaatcaagttgggaaaaatggaaaagaggtggaattaattgttgaagagaaa
ccattcactgttgagatctcccccggaccccagattgttgctcagattggcgactcagtt
gtgttgacatgtggtgtcacagactgtgagaccccatctttcacttggagaacccagata
gacagtcctctgagtgggacggtgaagactgaagggagcaagtccacactgaccctgagc
cctgtgagttttgagaatgaacattcttacctgtgcaccgtgacctgtggccgtaagaaa
gtggaaaagggaattaaagtggacctctactccttccctagagatccagagattgaaatg
agtggtctactcgtgagtggaaacccagtcactgtaagctgccaggttccgaatgtgtat
ccttctgacctgctggagattgaattacttaagggggagagtgttatagagaataaaaac
tttctgcaggacatggacaagaagtctctagagactaagagtttggaaatgaccttcatc
cctaccactgaagacatgggagaagttcttgtttgtctggctaagttacatattgatgaa
atggaatttgaacccaaacagaggcagagcacacagacgctttatgttaacgttgccccc
agggataccaccgtcttggtcagcccctcctccatcctggaggaaggtagttccgtgaat
atgacatgctccagcaacggccttccagctccgaaaattctgtggagcaggcagctgaat
aatgggcatctacagcctctttctgaaaattcaacactcaccttaacttctacaaaaatg
gaagactctggtatttatgtgtgtgaaggagttaaccaggctggaataagcagaaaagaa
gtagaactaatcatccaagttgctccgaaagacatacagcttacagcttttccttctgag
agtgtcaaggaaggagacactgttattatctcttgtacatgtggaaatgttcccaaaact
tggataatcctgaagaaaaaagcagagacgggagacacagtgctgcagtccagagatggc
gcgtacaccatccacaaggtccagttagaggacgcgggagtgtacgaatgtgaatctaaa
aatgaggttggcttgcaattaagaagtttaacccttgatgttaaaggaagaggaaagtac
caggactatttttctcctgaacttcttgtgctctattgtgcatcttccttaataataccg
gccattggaatgattatttactttgctagaagagccaacatgaaagggtcatacagtctt
gtagaagcacagaaatcaaaggtgtag
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integrated database retrieval system
