Hyaena hyaena (striped hyena): 120229685
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Entry
120229685 CDS
T07257
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
hhv
Hyaena hyaena (striped hyena)
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhv03021
]
120229685 (SCAF4)
03041 Spliceosome [BR:
hhv03041
]
120229685 (SCAF4)
Transcription machinery [BR:
hhv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120229685 (SCAF4)
Spliceosome [BR:
hhv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
120229685 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
TPP_enzyme_N
Motif
Other DBs
NCBI-GeneID:
120229685
NCBI-ProteinID:
XP_039084765
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVPENVTNNEGSPPPSVKVSSEPPQATTNSVPSVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTTPAQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEEAKKEDAAAAAAAAAAATATAPAVAV
TPSAPAATTPAATPATSPPQAPFGFPGDGMQQPTYTQHQNMDQFQPRMMTMQQDPVHHQV
PLPPNGQMPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQAAFQTPNEPLPQKTHQEMEVEQ
PCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRS
QERRDREKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESIN
MIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELG
VTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETSHTEPVSPI
PKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFAPGVPPP
PPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKD
LSIGNPIPTVVSGARGNAESGDSAKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGP
VIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGSFG
MPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQPQQPPPPQPQQPP
PAQQPPPAQQPSQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNR
ERREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEDNRGKEKPEVTDRAG
GNKAVEPPISQVGNVDTVSELDKGESESAVVKSSEELPAEATSSVEPEKDSGSAAEAPR
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgattctaatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccggagtacaaggtt
ccaggattatatgtaattgactcaattgtgcgacagtctcgtcatcaatttggaactgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgcgtgctgaacctttggcaaaaaaat
ggagtattcaaaattgaaattattcagcctcttttggacatggcagcaggaaccagtaat
gctgccccagtaccagaaaatgttactaataatgaaggttcacctccaccttcagttaaa
gtttcttctgaacccccccaagccaccaccaactctgtaccgtctgtaccacagttgcct
agctctgatgcttttgctgctgtggcccagctgtttcagacaactcaaggtcaacagctt
cagcagatccttcagacttttcagcaacctccaaaaccacagtctcctgccattgacaat
gctgtgatggcgcaggtccaggctatcacagctcagttaaagaccacccctgcacagcca
cctgaacaaaaagctgctttcccgccgcctgagcaaaaaactgcatttgacaagaagcta
ctcgatagatttgattatgacgatgagccagaagctgtggaagaagcaaagaaagaagat
gctgctgccgctgctgctgccgctgctgctgccaccgccacagcacctgctgtggctgtc
acaccttcagcacctgctgccaccacaccggctgccacgcctgccacttccccaccacag
gcaccctttggttttcctggagatggcatgcagcagccaacgtacacacagcatcaaaat
atggatcagttccagcctcggatgatgacaatgcagcaggatccggtgcaccatcaggtt
ccacttcctcctaatggacagatgccaggttttggccttcttcctacacctccatttcct
cccatggctcagtctgtgattcctccaactccacccgtgcagcagcctttccaagctgct
tttcagacgccaaatgaaccacttccacagaagacacatcaggaaatggaagtagaacaa
ccttgtatccaagaagttaagcgacacatgtctgataacagaaagtcgagatctaggtca
gcatccaggtcaccaaaaagaaggcgatctcgatctggctctagatcgcgaaggtcccgt
catcgccgttctcgttctcggtccagagatcgacgccgacattcgcctaggtctcggtcc
caagaaaggcgagatcgagaaaaagaaagagaacgccgacaaaaaggccttcctcaaatc
aaaccagaaactgcaagtgtttgtagcactacactctgggtgggacagctggacaaaagg
actactcagcaagatgttgcaagtctcctagaagagtttggtccaattgaatcaattaat
atgattcctccaagaggttgtgcctatattgttatggttcataggcaagatgcttatcgc
gccctgcagaaactgagccgaggaaactataaagtgaaccagaaatccataaagattgcc
tgggctttaaacaaaggaataaaggcagattataagcagtattgggatgtagaactgggt
gttacttatattccatgggacaaagtcaagcctgaagaactggagagtttttgtgaagga
ggaatgttggacagtgatacacttaatccagattggaaaggaatccccaagaagcatgaa
aatgaagtggctcaaaacggaggggcagaaacgtcccatacagaaccagtatcacccata
cctaaacctttgccagtgcctgtgcctcctattcctgttcccgcgcctataacagtgcca
cctccacaggtcccgccgcatcagccagggcctcccgtagttggtgctctccagcccccc
gctttcacgcctcccttgggcattcctcctccgggcttcgctcccggtgtgccgccgccg
ccgccgcccccaccgtttttgcgcccaggatttaacccgatgcatttaccaccaggtttt
cttcctcctggacccccacctcctataactccacccgtatccattcctcctcctcacact
ccaccaataagcatcccaaactctactatcgctggtataaatgaagacactacaaaagac
ttatctattggaaatcccattccaacagtggtgtctggggctagaggaaacgccgagtct
ggtgacagtgcgaaaatgtatggctccgctgtgccacctgctgcacccacgaatctgccc
acccctcctgtaacgcagcctgtttcacttcttggtactcaaggagttgcacctggtcct
gtcattgggctccaagcaccatccactggtcttcttggtgcccgacctggcctaatccca
ctacagcgccctccgggaatgcctccccctcacttacagcggtttcctttgatgccacct
cgccccatgccaccgcatatgatgcatcgaggtccgccaccaggacccgggagctttgga
atgcctccacctcatggaatgaagggcccctttccaccgcacggcccctttgttaggcct
gggggaatgccgggccttgggggcccagggccaggcccagggggtcccgaagacagagac
ggaaggcagcaacagccacagccacagcagccgcccccgccgcagccgcagcagccgcca
ccagctcagcagccgccaccagctcagcagccgtcacagccgtttagaaatgataacagg
cagcagttcaattcaggtagagaccaagagaggtttggaagaagatcttttggaaatagg
gtggaaaatgaccgggaacggtatgggaaccgtaatgatgatagagataatagtaaccgt
gaaaggagagagtggggaaggaggagccctgaccgggacaggcacagagacttggaagag
agaaatagacgctctagtgggcatcgagacagagagagagattctagagatagagagtct
cgtagagaaaaggaagacaaccgaggaaaggagaagcctgaggtgacagacagggcaggt
ggtaacaaagccgttgaacctcccattagccaagtgggaaacgtagacactgtttcagaa
cttgataagggggagtctgagtctgcagttgtaaaatcttctgaagagttacctgctgag
gctacctcatccgttgaacccgaaaaggattctggctcagcagcagaggctcctcgttag
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