Hyaena hyaena (striped hyena): 120233022
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Entry
120233022 CDS
T07257
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03082
ATP-dependent chromatin remodeling
hhv04714
Thermogenesis
hhv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120233022 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
120233022 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
120233022 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhv03000
]
120233022 (ARID1B)
03021 Transcription machinery [BR:
hhv03021
]
120233022 (ARID1B)
03036 Chromosome and associated proteins [BR:
hhv03036
]
120233022 (ARID1B)
Transcription factors [BR:
hhv03000
]
Eukaryotic type
Helix-turn-helix
ARID
120233022 (ARID1B)
Transcription machinery [BR:
hhv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120233022 (ARID1B)
Chromosome and associated proteins [BR:
hhv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120233022 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
TFIIA
Motif
Other DBs
NCBI-GeneID:
120233022
NCBI-ProteinID:
XP_039090007
LinkDB
All DBs
Position
Unknown
AA seq
2444 aa
AA seq
DB search
MAARAAAAAAAARAGSGERRAPPGPRPAPGARDLEAGARGAAAAAAAAPGPMLGGGGDGG
GGLNNVHHLPLHPRHELNMAHNASAAAAAASTTSAKSGGSEAALTEGGSAAARSSSSSAA
AAAPSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHH
HHALQQQLNQFQQQQQQQQQQQQQQQQQQQQHPISNNSLGGAGGGAAQPGPDMEQPQHGG
AKDSAAGGPADPPGQSLLSKPGDEDDAPPKMGEPAGGRFEHPGLGALGAQQPPVAVPGGG
GGGGGGGGGGGPAAAVSEFNNYYGSAAPASGGPGGRTGPCFDQHGGQQSPGMGMMHSASA
AAGALNSMDPLQNSHEGYPNSQYNHYPGYSRPSAGGGGGGGGGGGGGGGGGGGSGGGGGG
GGAGAGAVAAAAAAAAAAAGGGGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASL
SKAAAGAAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPP
PSQPQSQAAAAAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT
PGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPFSIQGR
TPGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQPQPPHLAAQAQYLPPQPQQRY
QPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLKDLSGS
IDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPV
GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQ
YGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPS
ASYSGPGPGMGINANNQMHGQGPSQPCGAMPLGRMPSAGMQNRPFPGNMSSMTPSSPGMS
QQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQ
HPNYGNSQAPMMHQPDQYGQGSFPGMNQTGLMASGSPYSQPVNNSSGLMNTQAPPYSMAP
NMVNSSAASMGLADMMSPGDSKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGN
LPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPE
RKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATN
LNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTADTKKQPKLQPPSPANSGS
LQGPQTPQSTGSNSMADLPGDLKPPTPASTPHGQMTPMQGGRSSAVSVHDPFSDASDSSF
PKRNSMTPSAPYQQSMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPTSSVQD
VYNQSPSGALSGLGMGRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQ
PNYKRHMDGMYGPPAKRHEGDMYNMQFGNQQQEMYNQYGSSYSGPDRRPIQGQYPYPYNR
ERVQGPGQMQPHGIPPPMMGGPMQPSSSEGPQQSMWAPRNDMPYPFPNRQGPGGPAQAPP
YPGMNRTDDMMVPEQRINHESQWPSHVSQRQPYMSSPASMQPITRPPQSSYQTPPSLPNH
ISRAPSPASFQRSLESRMSPSKSPFLPSLKMQKVLPTVPTAQVPGPPPQPPPIRREITFP
PGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVA
TFSLSQLSGFLELLVEYFRKCLIDIFGILTEYEVGDPGQKALDHNAGKRADGQALAGESG
KEEEGTECVDDDDDEDDDDEEEEEDDDGTTESGEKSSPTPASPSAAADLKEKPRQASKFD
KLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRR
PPPALSSTGRKKEQEGKGDSDEQQEKSIIATIDDVLSARPGALPEDANPGTQAESGKFPF
GIHQAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEM
SKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTL
VTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLET
LCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALA
ARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAM
ARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcggcggcggcggcggcgcgggcgggcagcggcgagcggcgg
gcgccccccgggccgcggccggcgcccggggcccgggacctggaggcgggggcgcgcggc
gcggcggcggcggcggcggcggcaccgggacccatgctggggggcggcggcgacggcggc
ggcggcctgaataatgtgcaccacctccccctgcacccccgtcacgaactgaacatggcc
cataacgcgagcgcggcggccgccgccgccagcaccaccagcgccaagagcggcggctcc
gaggcggctctcacggagggtggaagcgccgccgcgcggtcctcctcctcctccgcggcg
gcggcggcgccctcttcctcctcgtcgggcccgggctcggccatggagacggggctgctc
cccaaccacaaactgaaaaccgttggcgaagcccccgccgcaccgccccaccagcagcac
caccaccaccaccatgcccaccaccaccaccaccatgcccaccacctccaccaccaccac
caccacgcactacagcagcagctaaaccagttccagcagcagcagcagcagcagcagcaa
caacagcaacagcagcagcagcagcagcagcaacatcccatttccaacaacagcctgggc
ggcgcgggcggcggcgccgctcagcccggtcccgacatggagcagccgcaacatggaggc
gccaaggacagtgccgcgggcggcccggccgaccccccgggccagtctctgctgagcaag
ccgggcgacgaggacgacgcgccgcccaagatgggggagccggcgggcggccgcttcgag
caccccggcctgggcgccctgggcgcgcagcagccgccggtcgccgtgcccgggggcggc
ggcggcggcggcggtggcggcggcggcggcggcccggcggcggccgtctcggagtttaat
aattactatggcagcgctgcccctgctagcggcggccccggcggccgcactgggccttgc
tttgatcaacatggcggacaacaaagccccgggatggggatgatgcactccgcctcagcc
gccgccggagccctcaacagcatggaccccctgcagaactcccacgaagggtaccccaac
agccagtacaaccattatccgggctacagccggcccagcgcgggcggcggcggcggcggc
ggcggcggtggaggaggaggaggaggaggaggaggaggcagcggaggaggaggaggagga
ggaggagcaggagcgggagctgtggcggcggcggccgcggcggcggcggcagcagcagga
ggcggcggcggcggcggcggctatgggggctcgtcctcggggtacggggtgctgagctcc
ccccggcagcagggcggcggcatgatgatgggccccgggggcggcggggccgcgagcctc
agcaaggcggccgccggcgcggcggcggggggcttccagcgcttcgccgggcagaaccag
cacccgtcgggggccaccccgaccctcaaccagctgctcacctcgcccagccccatgatg
aggagctacggcggcagctaccccgactacagcagccccagcgcgccgccgccgccgccg
ccgtcgcagccccagtcccaggcggcggcggcggcggcggcggcgggggcggcggcgggc
ggccagcaggcggccgcgggcatgggcttgggcaaggacatgggcgcccagtacgccgct
gccagcccggcctgggcggccgcgcaacaaaggagccacccggcgatgagccccggcacc
cccggcccgaccatgggcagatcccagggcagccccatggatcctatggtgatgaagagg
cctcagttgtatggaatgggcagtaaccctcattctcagcctcagcaaagcagcccttac
ccaggaggctcttacggccccccggggccacagcgctatccattcagcatccagggtcgg
accccaggggccatgggaggcatgcagtacccacagcagcagatgccgcctcagtacgga
cagcaaggcgtgagcggttactgccagcagggccagcagccttactacaaccagcagccg
cagcccccgcacctcgccgcgcaggcgcagtacctgccgccccagccccagcagcggtac
cagccgcagcaggacatgtctcaggaaggctatggaactaggtctcaacctcctttggct
cctggaaaacctaaccacgaagacttgaacttaatacaacaagagagaccatcaagttta
ccagttgaagtcttgacctcggaggataccgcctttggactcaaggacttgtctggctcc
attgacgacctccccacgggaacggaagcaactctgagctcagcagtcagcgcgtctggg
tccacgagcagccaaggggatcagagcaatcctgcccagtcgcctttctctccgcacgcg
tccccgcatctctccagcatccctgggggcccgtcgccttctcccgtcggctctcctgtg
ggaagcaaccagtcacgatctggcccaatttctcctgcaagtattccaggcagtcagatg
cctcctcagccacccgggagccagtcagaatccagttcccatcctgccttgagccagtca
ccaatgccacaggaaagaggttttatggcaggcacacaaagaaaccctcagatgtctcaa
tatggacctcagcagacaggaccatccatgtcgcctcatccttctcccggaggccagatg
caccctggaatcagtagctttcagcagagtaactcaagtgggacttacggtccgcagatg
agccagtatggaccacaaggtaactactccagacccccaacgtatagcggggtgcccagt
gcgagctacagcggcccagggcccggcatgggcatcaatgccaacaaccagatgcacgga
caagggccaagccagccgtgcggtgctatgcccctggggcggatgccgtcagcggggatg
cagaacaggccgtttcccggaaacatgagcagcatgacgcccagctctcccggcatgtcc
cagcagggagggccaggaatgggcccgccgatgccaaccgtgaaccgtaaggcacaggag
gcagctgccgcagtgatgcaggccgctgcaaactcggcgcagagcaggccaccatacatt
aggtcgcctgcttatcccagccagtctggggctggcggacgccccatgttttcttcccag
caccccaactatggcaactctcaggctcccatgatgcaccagcctgaccagtacgggcaa
ggcagtttcccgggcatgaaccagactggactcatggcttccggctctccctacagccag
cccgtcaacaacagctctgggctcatgaacacccaggcacccccctacagcatggcgccc
aatatggtgaacagctcagcagcatctatgggtcttgcagatatgatgtctcctggtgac
tccaaattgcccctgcctctcaaagcagacggtaaagaagaaggcactccacagcctgag
agcaagtcgaaggatagctacagctctcagggtatctctcagcccccaacccccggcaac
ctgccagtcccttcccccatgtcccccagctctgctagcatctcctcatttcatggagat
gaaagcgatagcattagcagcccaggctggccaaagactccatcaagccctaagtccagc
tcgtccaccaccactggggaaaagatcacaaaggtgtatgagttgggaaatgagccggag
agaaagctgtgggtcgaccgataccttaccttcatggaagagagaggctctccggtctcg
agcctgcccgcagtgggcaagaagcccttggacctgttccggctctacgtctgcgtcaaa
gagattggcggtttggcacaggttaataaaaacaagaagtggcgcgagctggcaaccaac
ctaaatgtcggcacttcaagcagtgccgcgagctccctgaaaaagcagtacatccagtac
ctgtttgcctttgagtgcaagatcgagcgcggagaggagcccccgccggaagtgttcagc
accgcggacaccaagaagcagccgaagctccagccgccctctcctgcgaactcaggatcc
ttgcaaggcccacagaccccccagtcaaccggcagcaattcgatggcagacctcccaggc
gacctgaagccacctactccagcgtccacccctcatggacagatgaccccaatgcagggt
ggaagaagcagcgcggtcagtgtgcacgaccccttctcagacgccagtgactcatcgttc
ccaaaacggaactccatgaccccgagcgccccctaccagcagagcatgagcatgcctgac
gtgatgggaaggatgccctacgagcccaacaaggacccctttggtggaatgagaaaagtg
cctgggagcagtgagccctttatgactcaaggacagatgcccactagcagtgtacaagac
gtgtacaaccagagtccctctggagcgctgtccggtctgggcatggggcggcagcagttt
ccctacggagccagctacgatcgaaggcacgagccttatgggcagcaatacccaggccaa
ggccctccctcaggacagccgccgtatggaggacaccagcccggcctgtatccacagcag
ccgaattacaaacgccatatggacggcatgtacgggcctccagccaaacgccacgaggga
gacatgtacaacatgcagttcggcaaccagcagcaggagatgtacaaccagtacggaagt
tcctactccggaccagacaggaggcccatccaggggcagtatccgtacccctacaacaga
gagagggtgcagggccccggccagatgcagccgcatgggatcccgcctcccatgatgggc
ggcccgatgcagccgtcctccagcgaagggcctcagcagagcatgtgggcgccgcgcaac
gatatgccttaccccttcccgaaccggcagggccccggcggcccggcccaggcacctccc
tatccaggcatgaaccgcacggatgatatgatggtacctgagcaaaggatcaatcacgag
agccagtggccttctcacgtcagccaacgtcagccttatatgtcgtctcccgcctccatg
cagcccatcacgcgcccgcctcagtcgtcctaccagacgccgccgtcactgccgaaccac
atctccagagcccccagccccgcctccttccagcgctccctggagagccgcatgtctccc
agcaagtctccctttctgccctctctgaagatgcagaaggtcctgcccaccgtgcccacg
gcccaggtcccggggccgcccccccagccacccccgatccgacgggaaatcaccttccct
cccggctcagtcgaggcgtcgcagccagtcttgaaacaaaggcgaaagattacctcaaaa
gatatcgttactcctgaggcctggcgtgtgatgatgtccctcaagtccggtcttttggct
gaaagtacgtgggctctggacactattaacattctcctgtacgatgacagcactgtcgcc
accttcagtctctcccagctgtccggatttctcgaacttttagtagagtattttagaaaa
tgcctaattgacattttcggaattcttacggaatacgaggtgggagaccccggccagaaa
gcccttgaccacaacgcggggaagagagccgacggccaggcgttggctggcgagtctggg
aaagaggaggagggcaccgagtgtgtggacgacgacgacgacgaggacgacgacgacgag
gaggaggaggaggacgacgacgggacgacggagagcggggagaagagcagccctactccg
gcctctcccagcgccgccgccgatctgaaggagaagcccaggcaagctagcaagttcgac
aagctcccgataaagatagtcaagaagaacaacctgttcgtggtcgaccgatccgacaag
ctgggtcgtgttcaggagttcaacagtggacttctgcactggcagcttggtgggggggac
accaccgagcacatccagactcactttgagagcaagatggaaattcctcctcgcaggcgt
ccaccccccgctctgagctccacagggaggaagaaagagcaggaaggaaaaggcgattct
gacgagcagcaagagaagagcatcatcgccaccatcgatgatgttctgtctgctcggcca
ggggcgctgcccgaagacgcaaaccccggtacccaggccgagagcgggaagtttcccttt
gggatacatcaagccaaaagtcaccggaacatcaagctgctggaggacgagcccaggagc
cgagatgagacccctctctgcaccatcgcgcactggcaggactctctggctaagcgctgc
atctgtgtgtcaaatattgtccgtagcttgtcttttgtgcctggcaatgacgccgaaatg
tccaaacatccaggcttggtgctgatcctggggaagctgattctccttcaccacgagcat
ccagagaggaagcgagcaccgcagacctacgagaaagaggaagacgaggacaaaggggtg
gcctgcagcaaggatgagtggtggtgggactgcctggaggtcttaagggacaacacgttg
gtcacgttggccaacatttccgggcagctagacttgtctgcgtacacagagagcatctgc
ctgccgattctggacggcttgctgcactggatggtgtgcccgtcggcagaggcacaagac
ccctttccaaccgtgggacccaactctgtcctgtcgcctcagagacttgtgctggagacc
ctctgcaaactcagcatccaggacaacaatgtggacctgatcttggccacgcctccattt
agtcgccaggagaaattctatgctacgttagttaggtacgttggggatcgcaaaaaccca
gtctgtcgagaaatgtccatggcgctcttatcgaaccttgcccaaggggacgcactggca
gcaagggcaatagctgtgcagaaaggaagcatcggaaacttgataagcttcctagaggac
ggggtcaccatggcccagtatcagcagagccagcataacctcatgcacatgcagccgccg
cctctagaaccacctagcgtggacatgatgtgccgggcggccaaggctctgctggccatg
gccagggtggacgagaaccgctcggaattccttctgcacgagggtcgattgctggatatc
tcgatatcagccgtcctgaactctctggttgcgtctgtcatctgtgatgtactgtttcag
attgggcagttatga
DBGET
integrated database retrieval system
