Hyaena hyaena (striped hyena): 120233038
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Entry
120233038 CDS
T07257
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
hhv
Hyaena hyaena (striped hyena)
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhv03021
]
120233038 (SCAF8)
03041 Spliceosome [BR:
hhv03041
]
120233038 (SCAF8)
Transcription machinery [BR:
hhv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120233038 (SCAF8)
Spliceosome [BR:
hhv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120233038 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120233038
NCBI-ProteinID:
XP_039090037
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MPQPLLPALPPPSSLCAAGSCGPSGGECSGRRLFRRRARGLRTDNMEAVKTFNSEDCAST
PACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKC
KPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVL
NLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGL
PDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQPSILQALDAGLVVQLQ
ALTAQLTAAAAAANTLNPLEQGVPFSKKLMDRFDFGEDSEHSEEPKKEISASQLSHVSES
VNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQH
FLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKR
RSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSV
CSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSS
GSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQET
VNTEWETVKSSEPVKETVQTTQSPPPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSL
VPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTP
LVQPPLSMTPETVKDVGFGSLVLPGGSVASNLATSTLPAGNVFNPSTKQAEPEEKVPHLL
DHQIPSAESTRAVIPNDISSSSAILGGQPPNVTSNSGGILGVQRPNVSSNSEIIGVRPSN
VSSSSGIIGAQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNNSGLIGVQPPNVPNT
AGLLGTQPPAGPQNLPPLNLASQRMPAMPMLDIRPGLIPQTPGPRFPLIQPGIPPQRGIP
PPSVLDSALHPPPRGPFPPGDIFSHPERPFLVPGRQSVDNVTNPEKRIPLGNENIQQEGD
RDYRFPPIEARESLSRPPPVDVRDVVGRPIDPREGPGRPPPLDGRDHFGRPPVDIRENLV
RPGIDHLGLRDHFAFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPR
SGPWNRGFGQEVHRDFDDRRRPWERHRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHA
RVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKLTSSSEINKEKNDT
VADIESEPVVESTETEGT
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgctgctgccagcgcttcctcctccgtcttcgctgtgcgctgctggttcc
tgcggcccgagcggcggggagtgcagtggccgccgcctcttccgccgccgggctcggggc
ctccgcaccgacaacatggaggctgtgaaaaccttcaatagcgaggattgtgcctctact
cctgcttgtacagactgcttttccagcagcatggacacaagaagcatattgtattccctg
aatgactacaaaccacccatttctaaagcgaaaatgacccaaattactaaggcagccatc
aaagctattaagttctataaacatgtggtacagagtgttgagaaattcattcagaaatgt
aaaccagaatacaaggtacctggactttatgttattgactctattgtacgacaatctcga
catcagtttggtcaagaaaaggacgtgtttgcacccagatttagtaataacatcattagc
actttccagaatttatatcgttgccctggggatgacaagagtaaaatagtgagagtatta
aacttatggcagaagaataatgtgtttaagagtgagattattcagcctcttctggatatg
gccgcagggatccctcccccggtcgtcacccctgtgttggccagtactactgctgccatg
agcaacacccccggaactcctgtgacacctgttactccagccaatgtggtccagggtctg
cccgacccgtgggtatctcagataacgaatacagatacacttgctgcggtagctcagatc
ttacagagtcctcaaggccagcagcttcagcagttgatacaaactttacagctacagcag
cagaagcctcagccgtccatcctgcaggccctggacgccgggctggtggtgcagctgcaa
gccctcacggcacagctcacggccgcggccgcagcggccaacacgctgaaccccctagag
cagggggtgcctttcagcaagaagttgatggataggttcgattttggggaagattccgag
catagtgaagaacctaaaaaggaaatttcagcttctcaactttctcatgtttcagaatct
gtgaacaattcaatttttcatcagatagcggaacaattacagcagcaaaaccttgaacat
ctcagacagcagctcctggaacagcaacagcctcaaaaggcaacccctcaggatagtcaa
gaaggaacatttggatcagagcattctgcatcaccatcacaagggagcagtcaacagcat
ttcctcgaacctgaagcaaatttggatgattctatagatattcaacaacaggacatggat
atagatgaagggcaagatggagtggaagaggagatcttcgaacaagaagcaaagaaagtg
gctgttcgctcaagatcaagaacacattcacgttctcgttcaagatcgccaagaaaacga
aggtctcggtcgcgatctggttctcgaaagcgtaaacacagaaagcgatcacgctcacgc
tcgagagaaagaaagaggaaatcatcacgttcatactcaagtgaaaggagagcaagagaa
agggagaaagaacgacagaagaagggattacctccaattagatctaaaacattaagtgta
tgtagtactactttatgggttggccaggtggataagaaggcaacccagcaagatttaacc
aatctgtttgaagagtttggacaaattgaatccattaatatgattcctcccaggggctgt
gcatatgtctgcatggttcaccgacaagatgcttttcgggctcttcagaaacttagttct
ggatcatataaaattgggtccaaggtcatcaagattgcttgggctttaaacaaaggtgta
aaaacagaatataaacaattctgggatgtggatcttggagttacatacataccatgggaa
aaagttaaagtggacgacttggaaggttttgcagaaggaggcatgattgaccaggaaaca
gtaaatactgagtgggaaactgtgaaaagctcagaacctgttaaagagacagtccagaca
actcagagcccacctccggttgaaaaggagacagtggtcacaacccaggcagaggttttt
cctccacctgttgctatgttacagattccagtagctccagctgtgcctacagttagttta
gttccaccagcatttccggtctccatgccggttcctcctcctggattcagtcccatccct
ccacctccttttctgcgagcgagttttaacccttcacaaccacctcctggcttcatgcct
cctccagtcccaccgcctgttgtaccaccgcctgccatcccaccggtagtgccaacgcct
ttagtgcagccgccattatccatgactccagaaactgtgaaggatgttggatttggtagt
cttgttttaccgggtggttctgttgccagcaatcttgctacttccactctgccagctgga
aatgtttttaatccttcaactaaacaagcagagcctgaagaaaaagtacctcatcttcta
gaccaccagattccttctgctgaaagcaccagagcagtgattccaaatgatatttcaagt
agctctgcgattttaggaggacagccaccaaatgtgacaagcaattctggaggaattctg
ggagtccaaagaccgaatgtatcgagtaattctgaaattattggagtacggccatctaac
gtttccagtagttctgggattattggagcccagccaccaaatattctaaataactctgga
attttgggactacagccaccaactgtgtcaagtagttctggacttttgggagtgctaccc
ccaaatattcctaataattcgggacttataggagtacagccaccaaatgttccaaacact
gctggacttttgggaacacagccaccagccgggcctcaaaacctaccccctttaaatctc
gctagtcagaggatgcctgcaatgccaatgttagacattcgtccaggactaataccacag
acacctggaccaagattccctttaatacagcctggaattccaccccagcggggaatccct
cccccatcggtacttgattcagctcttcatccaccaccccgtggtccttttcctccagga
gatatttttagtcatccagaaagaccttttctggttcctggaagacaaagtgtagacaat
gttactaatccagaaaaaaggataccacttgggaatgaaaacattcaacaggaaggagat
agagattaccggtttcctcccattgaagccagggaaagccttagtagacctcccccggtg
gatgttagggatgtggttggacggcctatagatccaagagaaggtcctggaaggcctcct
ccgttagatggtagggatcattttggaagacctcctgtcgatattagagagaatcttgtg
aggccaggcatagatcaccttggtctaagagaccactttgcgtttaatccagaaaagccc
tgggggcatagagattttgatgagagagaacatcgggttctacctgtgtatggtggtcca
aaaggcttacatgaagaaagaggtcgatttcggtctggaaattatcgatttgatcctaga
agtggtccttggaacagaggatttggacaagaagttcacagagattttgatgaccgcaga
agaccttgggagaggcacagggatagggatgacagagattttgatttctgcagagaaatc
aatggaaaccgtcttggacgagatagaattcaaaacacctgggtgccccctcctcatgct
cgggtttttgatttttttgaaggggccacttctcaacgaaaaggtgataatgtgcctcag
gttaatggtgaaaatactgagagacatgcccaaccaccacctttaccagtacagaatgat
cctgaactttatgaaaaactgacctcttcaagtgaaataaacaaggagaagaatgacaca
gttgctgatatagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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