Hyaena hyaena (striped hyena): 120235063
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Entry
120235063 CDS
T07257
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
hhv
Hyaena hyaena (striped hyena)
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhv04040
]
120235063 (SCN11A)
Ion channels [BR:
hhv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120235063 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
120235063
NCBI-ProteinID:
XP_039093105
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTPDTLAMIEKRIAAQKEKKKHKDQTPAEPLPRPQLDLKVSR
KLPKLYGNIPRELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSARRALFVFGPFNPVRS
LAIRISVHSVFSMFIIGAVVTNCVFMATACGKDGSSLYADSAEYVFTGIYIFEALIKILA
RGFVLDEFSFLRDPWNWLDSIVIATAFVSYFPSISTSGISLSSLRTFRVFRALKAISVVS
GLKVIVGALLRSVKKLVDVMILTLFCLSIFALVAQQLFKGSLDQRCVRKECGGMDTLEDY
CFEKKDSAEFRMCGSWLGESACSEEFQCNHTRRNPDYGYTNFDNFGWSFLSMFRLMTQDS
WERLYQQTLRTSGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKM
FQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGKRNRKSFFLRDSGKDQPS
GSDSDEDATKKPHILEQTKRLSQNLSVDHYDEHGDPFQRQRALSAVSILTITMQEQEKSQ
EPCLPCGGNLASRYLVWNCSPQWLCVKKTLRAVMTDPFTELLITVCIIINTVFLALEHYK
MDRSFELMLYTGNVVFTGIFMAEMCLKIIALDPYNYFRRGWNVFDSIVALLSFADVMNSL
VVGKQSPLFFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVG
MQLFGSKFNSVRNNTKSCGPAVPCLRRWHMGDVYRSFLVVFRILCGEWIENMWECMQETS
KPLCIVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGHLDGEAKKTKVQLALDRFHRAF
CLVLRTLEHFCHTRCRRQNLPQHKEVSGRPAAESKDIIPLVTQMKKGSETWGDFGGLTCA
PKALSVERDRTWLAPLAEEEDDFESSGENKALRAARPEAGRQAYELHPETKRSTSPGAQS
VEIDVFSEDDICLSVQNPRKKSDTTSVLSECSTIDPQDPFARAPEMVPKKEPERCFPKGL
GHCCPCCAVDKRKSPWIIWWNLRKTCYQIVKHSWFESFVIFVILLSSGALVFEDIHLEKR
PNIQALLNCTDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLKSL
KSFRTLRALRPLRALSQFEGMKVVVNALVGAIPAILNVLLVCLIFWLIFCILGVYFFSGK
FGRCVNRADANSVINYSIVANQSQCEGGNFSWVTLPVNFDNVGMAYLALLQVATFKGWMD
IMYAAVDSRGKELQPGFEENPINYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKISGE
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDIIIIILIFLNMV
SMMIESDNHPKDTKVFLERLNLAFVVIFTTECLIKIFALRQYYFTNGWNLFDCVIVVLSI
VSAMVSALEDQQHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIG
LLLFLVMFIYAIFGMNCFCKVKEGFGIDDIFNFRTFVGSILCLFQITTSAGWDALLRPML
QSNESCNPSLDSRHLPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGED
DFEIFYEVWEKFDPEATQFIKYPALSDFADALPEPLRVAKPNRFQFLVMDLPMVSGDRLH
CLDILFAFTTRVLGDSSGLDSMKAMMEEKFMEANPSKKLYEPIVTTTKRKEEEKCAAIIQ
KAFRKYKLKMSTCALEDGPRSPLQTLCNGDLSSSEVAEGKVHYD
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccggtgatctttccagatgagcggaatttccgacccttcact
cctgacaccctggctatgattgagaagcggatcgccgcccaaaaggagaagaagaagcac
aaagaccagacaccagcagagcccttgcctcggcctcagcttgacctcaaggtctccagg
aagttgcccaaactctatggcaacattccccgtgagctgatagcacggcccctggaagac
ttggacccattctacagaaatcataagaccttcatggtgctgaacaaaaagaggaccatc
taccgcttcagcgcccggcgcgccctgttcgtcttcgggcctttcaaccccgtccggagt
ctggccatcaggatctcggtccattccgtgttcagcatgttcatcatcggcgccgtggtc
accaactgcgtgttcatggccaccgcgtgcgggaaggacggcagcagcctgtacgccgac
agtgccgagtatgtcttcactgggatttatatttttgaagctttgataaaaatattggca
agaggttttgttctggatgagttttcttttcttcgagatccatggaactggctggactcc
attgtcattgcaacagcgtttgtatcatacttcccgagcatcagcaccagcggaatcagt
ctgtcgtccctgcgcaccttccgggtgttcagagctttgaaagcaatttcagtggtttca
ggtttgaaggtcattgtcggggccttgctgcgctctgtgaagaagcttgttgatgtaatg
atcctgactctgttttgcctcagcatcttcgccctggtagctcagcagctcttcaaggga
agcctggaccagagatgtgtcaggaaggagtgtgggggtatggacacccttgaagactat
tgctttgaaaagaaagactcggctgaattcagaatgtgcggcagctggctgggtgaaagc
gcctgttccgaagaatttcagtgcaaccacaccaggcggaaccctgactacggttatacc
aacttcgacaacttcggctggtctttcctgtccatgtttcggcttatgacccaagattcc
tgggagaggctttaccagcagaccttgcgcacctcggggctcttctcggtcttcttcttc
gtggtggtcatcttcctgggctccttctacctgattaacttgaccctggctgttgtcacc
atggcttacgaggagcagaacagaaacgttgctgccgagaccgaggccaaggagaagatg
ttccaggaagcccagcggctgctgaaggaggagaaggaggctctggttgctatgggaatt
gacagaagttcacttaattccctggaggcatcatctttttccccaaagaagagaaagcta
tttggtaagaggaaccggaagtccttttttttgagagactctgggaaagatcagccttca
ggatcagattctgacgaagatgccacaaaaaagccacacatcctggagcaaaccaaacgg
ctgtcccagaacctgtccgtggatcactatgacgaacacggggaccccttccaaaggcag
agggcgctgagcgctgtcagcatcctcaccatcaccatgcaggagcaagagaaatcacag
gagccttgcctcccctgtggagggaacctggcgtccagatacctcgtgtggaactgcagc
ccccagtggctgtgcgttaagaagaccctgcgagccgtgatgaccgaccccttcacggag
ctgctcatcaccgtctgcatcataatcaatactgtcttcctggccttggagcattacaaa
atggaccgcagttttgagctcatgttgtatacagggaatgtggttttcactggcattttc
atggcagaaatgtgcctgaaaatcattgcgctcgacccctacaactacttccgccgaggc
tggaacgttttcgacagcatcgtggctcttctgagttttgcagatgtgatgaacagtttg
gttgtaggaaagcagagtcctctgtttttccattccttaagagtgctaagggttttcaag
ttagccaaatcctggccaactttaaacacactgataaagataattggtcactccgtcgga
gccctgggaaacctgaccgtggtcctggccatcgtcgtcttcattttctcagtagttggc
atgcagctttttggctctaagttcaattctgtaaggaataatacaaagtcgtgtggccct
gcagtgccgtgcttacgacgctggcacatgggggacgtgtatcgctcctttctggtggtg
ttccgcatcctctgtggggagtggatcgaaaacatgtgggagtgcatgcaagaaaccagc
aagcctttgtgcatcgtcgtctttctgttgatcatggtgataggaaaactcgtggtactc
aacctcttcattgccttgctgctcaattccttcagtaacgaggagagggatggacacttg
gatggagaagccaagaaaaccaaagtccagttagccctggatcggttccaccgggctttt
tgccttgtattacgtactcttgagcatttttgtcacacgcggtgcaggagacagaactta
ccccagcacaaagaggtgtccgggcgccctgccgccgaaagcaaagacatcattccgctg
gtcacacagatgaagaagggctcagagacctggggggactttggcggactgacttgtgca
ccgaaggccttgagtgtggagcgtgatcggacttggttggccccacttgcagaggaagag
gacgattttgaatcttctggtgagaacaaggcactgcgggccgcacggcctgaggctggc
agacaggcctatgaactccatccggagaccaagaggtcaaccagcccaggggctcaaagt
gtggaaattgatgtgttctctgaagatgacatctgtctgtccgtacagaatccccgaaag
aagtcggacaccaccagtgttctctcagaatgtagcaccattgacccacaggatcctttt
gcgagggcacctgaaatggttcccaaaaaagaaccagagagatgttttcccaaaggcctg
ggtcactgctgcccatgctgtgccgtcgacaagagaaagtccccctggatcatttggtgg
aacctgcggaaaacctgctaccaaatagtgaaacacagttggtttgaaagctttgttatc
tttgtgattctgctgagcagtggggcactggtatttgaagatattcaccttgagaaacga
cccaatatccaagcattacttaattgtactgaccatattttcacatacatttttatcctg
gagatgggtctaaaatgggtagcctttggatttgggaagtatttcaccagtgtctggtgc
tggcttgatttcatcattgtgattgtctctgtgaccagtctcattgacttaaagagcctg
aagtccttcaggactctgcgagcgctgaggcccctgcgcgcattgtcccagtttgaagga
atgaaggtggtcgtcaacgctctcgtaggcgccatacctgccattctgaatgttttgctt
gtctgcctcattttctggctcatattttgtatcctgggagtatacttcttttctggaaaa
tttggaagatgcgttaatagagcagatgcaaactcagttataaattacagcattgttgca
aaccaaagtcaatgtgaaggtggaaatttctcttgggtcaccctgccagtcaactttgac
aatgtgggaatggcttaccttgccctgttgcaagtggcaacgtttaagggctggatggat
attatgtacgcggccgtggattccagagggaaagaactacagccagggtttgaggagaac
ccaataaactaccttttcttcgtggcttttatcatctttggttcattcttcactctgaat
ctcttcatcggtgttatcattgacaacttcaaccaacagcagaaaaagataagtggtgag
gatatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaattaggatcc
aaaaaacctcaaaagcccattccaaggcctctgaataagtgccagggtctcgtgtttgac
ctagtcacaagccaggtctttgacatcatcatcatcatcctcatcttcctcaacatggtc
agcatgatgattgagtctgataaccaccctaaggacacaaaagtcttccttgagcgtctc
aacctggcctttgtggtcatcttcacaaccgagtgtctcatcaaaatctttgctttgagg
caatactacttcaccaatggctggaacttatttgattgtgtgatcgtcgttctctctatt
gttagtgcgatggtttctgccttggaggaccagcagcacattcccttccctcccacgctc
ttccgagtggtgcgcttggcccggatcggccggatcctgagactcgttcgggcggcgcga
ggaattcggacgctcctttttgctctgatgatgtcccttccctctctgttcaacattggt
cttctacttttcctcgttatgtttatttatgccatctttggtatgaactgtttttgcaaa
gtgaaggaagggtttggaattgatgacatattcaacttcagaacttttgttggcagcatc
ctctgcctctttcagatcaccacgtccgcaggctgggatgccctcctcaggcccatgctg
caatcaaatgagtcgtgtaaccccagcttagacagccgtcacctccctgccatagccatc
acctacttcgtcagctacatcatcatttcctttctcattgttgtcaacatgtacattgct
gtgatcttggagaacttcaatacggccacagaagaaagcgaggaccctttgggtgaagat
gactttgaaatattctatgaagtctgggaaaagtttgacccagaagcaacacagtttatc
aaatatcctgccctttctgactttgccgatgcccttcccgagcctttacgtgtggcaaag
ccaaatagatttcaatttctagtgatggacttgcccatggtgagtggagatcgcctccac
tgcctggacattctcttcgcattcactactcgggtgcttggtgactccagtggcctggac
agcatgaaagcaatgatggaggagaagttcatggaggccaacccctccaagaagttatat
gaacccatagtcaccaccaccaagaggaaagaagaggaaaaatgtgctgctattatccaa
aaggcctttcgaaaatacaagctgaagatgtccacgtgtgccttagaagacgggccccgt
tcgccactgcagacgctctgcaatggggacctctccagctccgaggtggctgagggcaag
gtccactacgactga
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integrated database retrieval system
