Hyaena hyaena (striped hyena): 120236475
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Entry
120236475 CDS
T07257
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120236475 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhv04121
]
120236475 (SLX4)
03400 DNA repair and recombination proteins [BR:
hhv03400
]
120236475 (SLX4)
Ubiquitin system [BR:
hhv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120236475 (SLX4)
DNA repair and recombination proteins [BR:
hhv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120236475 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
YlbE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
120236475
NCBI-ProteinID:
XP_039095230
LinkDB
All DBs
Position
Unknown
AA seq
1755 aa
AA seq
DB search
MELQTSHLSRTPEGLKVGEMMDESDDDFKELCATFLQRVKKNGTKEVSGERKTQKASNST
EISKLKRTKPAATKSKPLQGPREKKSRSGSQAPRTKRQGAPKLQESKPAPPENGEGSVPA
SAVLRESVQNPQTEATRDSDSQPPPSHLTVMGPSPSKPRTAELVLQRMQQFKRADPERLQ
HASKRCSLESAVEENLPKGPGEEMTGDGLGPGLPATESDAAVALALQQEFGQEKASLHEN
LEETGWFFCQICRKNLSAMNVTRREQHVNRCLDETEKALTPSTPRIPECPICGKPFLTPK
SRISHLKQCAVKMDVGPQLLLQAVRLQTALPEGASGILASSFSNHVGGLKQRGATTQKEL
QRKQRVTKPEAPSEELLMAMALSRSEMEQEAGPVALRLGGAFSERIRLGAEKKSRKRKAP
VSPPLLLVQDPETTGRQTEDRVAQLFAEEMELACTPPLPASRILKEELGKAGWCLQPSGK
KQNFLWEGSALTGAWALEAFYTASLVPPMVPQRPTKALTQEPMLPPVLPDQPELGVQTSP
ALPSAHRTGHGPRSLPASASQREHQALQDLVELAGEGLGATPWPCSGGPASSGGAAGIDL
SPTGLPLTGFILPSQEEQLERGSQASLTLSLLLADFRAMVNNPQLSDIQFQTDSGEVLYA
HKFVLYARCPLLMQYVNSEGFFAAEDDDVRSQRVLLSDVNTEAALALLHYLYTADPGVPP
RLAPGLSDLAHRFGVSELVLLCEQAPDVIDSEDRPRKEKEDKDCESRAENFQELLRSMWV
KEEEEAEASLKSEGCKEDTEKVDEAEMEEIYEFAATQRKLLQGESSPEVKEEMDQFREDG
SMSAQISVSVQVHEQPENAEAMELCGQRRDEAPAKWKSMRPSTPLLLKGQQADREKAGSP
EEALGHPGSSCPSQGRQAGRKEDALWCSAAAAAEQPFSSTPRRCPEPFQTTSDFQEGNGT
GAESPCTPGCGQVPPLRLCLSQPPQGRSPSRPHPRPQHTGKSPSRASWASSQDSPSKQKR
VRSLRKLLKDPGVQKGEGRGSLLECRNKEALISPEKSPSIDLTQSNPGHLSSRSENTPSS
KNREDEIILLLDSDEELELEQTKTKSVLNGPLEERKVLEVSSKSCELFSVIDVDADQDSF
QSPPRREAGLLCGEERPPGSRGSGEGRGTHRLFCDPESGPEEDSTTDASWLVPATPLASR
SRDSSSQTQITGLRARALVDHVVQFKSWAPLGNRDAPEAANKCSVTRPQMSPPCLGPVSA
GSPDSRGPCSPHPRRLQPFTPLAPCPISGGLADSTEQLQKYSPPGPSLLNRATTSEVVEV
EDSEDEREEVNSSPLLDNDPPILVDDCRWHVEPLSPIPIDQLNLELMGPLSTSSPSSDGS
SPAFLGTTPIRQSRTSQRKAREKSPRASSPGSGRLSFLNSALWDDWDGEQKPPELLPPAQ
TRSPDEAQKSKGLETPKGANWKNLPPKMPITPMPRYSIMETPVLKKELDRFGVRPLPKRQ
MVLKLKEIFQYTHQTLESDSENESQSSHVLLEAPHSQTHPSKTSKASRAAGRAQLEAASG
PLLHRSKGSTKTNQKTQPGGSLSPMSMSLAREEPPDPDGDAQLPASQESVASSMDSSDSS
FSSQSSSFEFGAALESAGDEEGQEEVSVSQTAVQAAATEEAVRRYIRSQPALYRKALLYQ
PFELAELQAELKQHGIHMALGKLLDFLDAHCITFTTSAARKEKLQRKRQRPVGKKKGDRA
SRPVCPSPPAAISSL
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcaaacctcacacctctcaagaacacctgagggccttaaagttggtgagatg
atggatgagtcagacgatgattttaaggaactctgtgccacctttctccaaagggtgaaa
aagaatggcaccaaggaggtgtcgggggaaaggaagacacaaaaggcctcaaacagcact
gagataagcaaactgaaaaggaccaaaccagctgctaccaagagcaaaccccttcaaggc
cccagggagaagaagagtcggtctggcagccaggccccaaggactaaaaggcaaggggca
cccaagttgcaggagagcaaaccagctccccctgagaatggagagggaagtgtgcctgcc
tctgctgtgctccgggagagtgtgcagaacccccagacagaagcgactcgggacagcgac
tcccagccccctccttcccatctgacagtgatggggccgagtccctccaaaccccggaca
gcagagctggtcctgcagcgaatgcagcagttcaagagagcagaccctgagcgcctgcag
catgcttccaaacggtgctccctggagtctgcggttgaagaaaacctgccgaagggccct
ggagaggagatgacaggggatgggttggggcccgggctccctgccacagagagcgacgcg
gcggtggccttggccctgcagcaggagtttggccaggaaaaagcatccttacatgagaac
ctggaggagacggggtggttcttctgccagatctgtcgtaagaatctctcagccatgaac
gtgacacggagggagcagcatgtgaaccggtgcttagatgagactgaaaaggcattgaca
ccctccacacctcggatccccgaatgcccgatttgtgggaagccatttctcaccccaaag
agcagaatcagtcacctgaaacagtgcgcagtgaagatggatgtcggcccccagctcctg
ctccaggctgtgcgactgcagacggctctgccggagggggccagtggcatactggcatca
agcttcagcaatcacgttggaggtctgaagcagaggggagccaccacccagaaggagctg
cagaggaagcagagggtcaccaagcccgaggcgccgtctgaggaattgctgatggccatg
gccctgtcccggtccgagatggagcaggaggccgggccggtggcgctcagactgggaggc
gccttttctgaaaggataagactgggagcagaaaagaagagccgcaagaggaaggcacct
gtttcccctcccctgttgttagtccaggacccagagaccacggggaggcagacggaggat
cgggtggcccagctctttgccgaggagatggagctggcctgcacgccgccgcttcccgcg
agcaggattctaaaggaagagctgggaaaggctggctggtgtctgcagccgtctggaaag
aagcagaactttctatgggagggcagcgccctgactggggcctgggctctggaagccttc
tacacggcaagcctggtccctcccatggtgccccagcggcccaccaaggctcttacacag
gagcccatgctccccccagtgctgcctgaccagccagagctgggagtacagacgtcacct
gctctccccagtgcccaccgcacaggccacggccccaggagcctgcccgcctccgccagc
cagagggagcaccaggccctgcaggaccttgtggagctggcgggagaggggctgggtgcc
accccatggccctgcagtgggggccccgccagctcgggcggggcagcaggaatcgatttg
tcgcccactggccttccactgactggatttatcctgccctcccaggaggagcagctggag
aggggcagccaagcttcgctcactctcagtttgctgctggctgacttcagagccatggtc
aataacccacagctgagcgacatccagtttcagacagacagtggggaggtgctttatgcc
cacaagttcgtgctgtatgcccggtgcccccttctcatgcagtatgtgaacagtgaaggc
ttcttcgctgcagaggatgacgacgtgaggagccagcgcgtgctgctgagtgatgtgaac
accgaggccgccctcgcgctcctgcactacctctacactgcagaccccggcgtgcctccc
cggctggcccccggcctgagcgatctggcccacaggtttggtgttagtgagcttgttctt
ctgtgtgaacaagcacctgacgtgatagattcagaggacagaccacgaaaggagaaggaa
gacaaggattgtgaaagccgggcagagaacttccaagaactcttgagatccatgtgggtg
aaggaagaggaagaagcagaggcttcattgaaatctgagggctgtaaagaagacacagaa
aaagtggatgaggcagaaatggaagagatttatgaatttgcagccactcagcgcaagctg
ctccagggggaaagcagtccagaggtcaaggaagaaatggaccagttcagggaggatggt
tctatgtctgcacaaatctcagtaagtgttcaggttcatgaacagccggaaaatgcagaa
gcgatggaactgtgcggccagagaagagatgaggccccagccaaatggaagagcatgaga
ccttccacgcccctgctactcaagggccagcaagcagacagagagaaagcagggtcccca
gaggaagcactggggcatcccggctcctcttgcccttctcagggccgtcaggcagggaga
aaggaagatgccctttggtgctcggctgctgctgctgcagaacagccattttcatcgact
cccagaagatgccctgaaccgttccagacaacgagtgatttccaggaagggaatggcacg
ggggcagagagcccctgtacccctggctgcgggcaggtgcccccattgcgcctgtgcctg
tcacagcccccgcaaggcaggagtcccagccggccacaccctcgccctcagcacacaggc
aagtcgcccagcagagcctcttgggcgtcctcccaggactcaccgtccaagcagaagagg
gtcaggagcctccgcaagctacttaaagatccaggcgtccagaaaggcgaaggacgtggt
tccttgttggagtgcagaaataaagaggctctgatctccccagaaaaatctccatccatt
gacctaacccagtcaaatcctggtcatttgagctctagatctgagaatacgccatccagc
aagaacagagaagatgagatcatccttttgttagactcagatgaagagctggagctagaa
caaaccaagacaaagtctgttcttaatggtcccctggaagaaaggaaagtgctagaagtt
agcagcaagtcttgtgagctgttttctgtcatcgacgtcgatgcagatcaggactctttc
caaagcccaccacgaagagaggcggggctgctctgtggggaggagaggcctccagggagc
cggggctctggtgaaggcagggggacccatcggctgttctgtgaccccgagagtggcccc
gaagaggacagcaccacagacgcctcatggctggtgcccgccacccccctggccagcaga
agccgtgactcttcatcccagacccaaataacaggcctcagggccagggctttagtagat
catgtggtccagttcaagtcctgggcccccctaggaaacagggatgcacctgaagctgca
aataagtgttcagtaaccaggccccagatgtcgccaccatgcctgggccctgtcagtgca
ggaagtcctgacagcaggggcccatgcagtccccaccccaggcgcctccagccttttact
cctctggcgccctgtcccatctcagggggcctggccgatagcacagagcagctccagaag
tactcaccccccgggccgagcctgctgaatcgggctaccacgagtgaggtggtggaggtg
gaagacagcgaagacgagcgggaggaggtgaacagcagccccctgctggacaacgaccct
ccgatcctagttgacgactgccgctggcatgtggagcccctctcaccgattccaattgac
caattgaacctcgagctgatggggcccctgagcaccagtagtccgagcagtgacggcagc
tcccccgccttcctaggtaccacccccatccgacaaagccgcaccagccaaagaaaggct
cgagagaagtcccctcgggccagctcgcctgggagcggcaggctgagttttctgaactcc
gctctatgggacgattgggatggagaacagaagcctccagagctccttcctccggcccag
acacggagtcctgatgaagctcagaaatcaaaagggttagagactccaaaaggtgctaat
tggaagaacttgcccccgaaaatgcccataaccccaatgccaaggtattccatcatggag
accccggtattaaagaaagaactggataggtttggggtccgccctctacccaaacgccag
atggtcctgaaactgaaggagatattccagtatactcaccagactctggagtcagactcg
gagaatgagagccagtcctcacatgtgctcctggaggctccgcacagccagactcacccc
agcaagacgtccaaggcctccagggcagctggccgtgcccagctagaggccgcttctggc
ccccttctccacaggtcgaaggggtccactaagaccaatcaaaagacgcagcctggtgga
agcctctctccaatgagcatgtcactagccagggaggagcctccagaccctgatggtgac
gcccagctcccagcctcccaggaatcagtggcctcctccatggacagcagtgacagctcc
tttagctcacaaagttcttcctttgagtttggagcagccttggagtctgcaggggatgag
gagggtcaagaggaggttagtgtatcacagacggccgtccaggcggcagccacagaggag
gcagtgaggcgctacatccgctcccagccggccctctaccgcaaggccctgctctatcag
ccctttgagctggccgagctgcaggccgagctgaagcagcatggcatccacatggccctg
gggaagctgctggatttcctggatgcccactgtatcaccttcaccacctctgcggcccgg
aaggagaagctccagaggaagaggcagcggcccgtgggcaagaagaagggggacagggcc
agcaggccggtctgcccctccccgcccgcggccatcagcagcctgtga
DBGET
integrated database retrieval system
