Hyaena hyaena (striped hyena): 120237207
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Entry
120237207 CDS
T07257
Symbol
SHOC1
Name
(RefSeq) LOW QUALITY PROTEIN: protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
hhv
Hyaena hyaena (striped hyena)
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhv03036
]
120237207 (SHOC1)
Chromosome and associated proteins [BR:
hhv03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120237207 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
120237207
NCBI-ProteinID:
XP_039096325
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MFSAFKYCAVDYLYESTVRKKFCRNALLLRIPSCLYQDGNYYGGVIDNRYRRPWMRASAV
SVWGMTDLSVLDQWKASLFVEDFLEKKTVTGVVTRINCEFEEVVPSSNPNSQTEVEEASL
YTHEEDYTEVFTLVSNLEKCPALLAQNKDFFIDEEIIFVNSCKNQLPTLHTLLSRLKLYL
IKDPLLDFKGQNLTEANFFRECFSSQRDLKDFVKEDFYMDKENFCQEKLEDTVGLNETAS
ILLECEFLIPTSPKQEVDILSLARLKESLNLMPEIINYVDENENLFKRDLNTKHGIDIED
IKCSSTEIFAIQSYCELEYSKPVELEMPLTHLHQTHQHSSVTSLCTGLETFPFSPVCKIS
LLTAEESATKYHMVWQLESCRSSLKPFLLTVPRTEKPNSQYTVTDLKKIYSIEEESLVVN
PVSPEWWEKELNLLEAETLEHLNIYLCHDDLSADDTKMEIFLPTKALQFESWLEHKSCSS
PIILINEKSTNDHLLLPQKISTLAKEVPDLCFSDDCISVKRPTKEEKPKSDLELVYRISQ
NEENEDYLELNCTVPSIXSSSSPKIEKSSFKQDRKWKNDVDLLSDFIVLRNKHRTCTSKT
ELTVSKENDDKEEHSLTLQEESPIVCTNEALEKISQERKVDHVIEIQPSDSQCQAFCLLE
AAATPILKKLVCLCTLPAANWTFATVNFDETRFLLKEQEKVISDAIQQGMNDEREMTFKY
AALLHLLVTIRDVLLTCSLDTALGYLSNAKEIYKSILGSYLDDIWRQLEIVQFVREKKPE
TNYKIQELQCQILNWMQSEQQINVLIIIRMDSDGEKHLLVKILNEMEGLTLTVLQNKRND
FLESEGVLNGTSSCVVVHNQYIGADFPWSNFSFVVEYNFVENSCWTKHCKKLNIPHTAFK
VVLPDTVLKRSTLLDSFGGFLLEIQVPYVFFASEGLINTPEILQLLESNYNITLVERSCS
ESLKLFGGTECYVVVTVDEHTAIILQDLKELNCEKASDNIIMRLMALSFQYSYCWIILYN
KKTLNSEYHLTEKALHHLALIYAALVSFGLKSEELDVKLVIVPGVEEAALIVRQIADHSL
MTSKRDPHEWLEKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQ
ELLPEVPEKVLKHFCSITSLFKISSSSITKSPQIPSPQENGNQASTFTSQSSASGSSNSV
FQEPNEYYQYSDIGATVHKDTNITSNYNSSLTELRGKPCILSPVNSYNQASYWRDSSCNL
NIVHNHFLINTESRNMAGNSFQNWNDSESDGFSLDLTQMNCENIISPIDTQKKIVPGFIN
NQKKGTHVAKRPINKEVYTPNFSLEGSQSRLPWSFKKNVWEQQNHSFNLEYGEEQTTCDK
WYSQKDNLLANQQKCLSDELESFLHQSSNAGTKKTFCRELPSVPSLDLFCTSDPNVNQKE
FTSLYFHQRAGKCLGQKRHSESSPNSGDKKSLPDFTCSQLPQFKKRRLVYEKVPGRVDGQ
TRLRFF
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgcattcaaatattgtgcagtagactatttatatgagagtacagttaggaag
aagttttgcagaaatgctttattgcttcgaatcccttcatgtttatatcaagatggaaat
tattatggaggagttattgataatagatataggaggccatggatgagagcttcagctgtt
tcagtgtggggaatgacagatctctcagtcttggatcaatggaaagcaagtctctttgtg
gaggatttccttgagaaaaaaacagtcacaggagtggtgacccggattaactgtgaattt
gaggaagttgttccaagttcaaacccaaactcccaaactgaagtagaggaagccagttta
tacacccatgaggaggactacactgaagtctttacacttgtcagcaatttagaaaaatgt
ccagcactcctagcacagaacaaagatttttttattgatgaagaaataatttttgtaaat
agctgtaaaaatcagctaccaactttgcatactctgttgagtaggctaaaactatatttg
ataaaggacccccttttagatttcaaaggacagaatctcacagaagcaaatttcttcagg
gaatgtttctcttctcaaagagatttgaaagattttgtgaaagaagatttttacatggat
aaagagaacttttgtcaggaaaagctagaagatacagtaggtttaaacgaaactgcatca
attttgcttgagtgtgaattcttaatacctacaagccccaaacaagaagttgatattctg
tcacttgccagactaaaggaatcattaaacttaatgccagaaataataaattatgtagac
gaaaatgaaaatcttttcaaaagagatcttaataccaagcatggaattgacattgaggat
ataaaatgcagctccacagagattttcgccattcaaagctattgtgaactagagtacagt
aaaccagttgagttagaaatgccattaactcatctacatcaaacacaccaacattcttct
gtgacttcattatgtacagggcttgagacgtttccattttctcctgtttgtaaaattagt
ttgcttaccgctgaagaatcggctaccaaataccatatggtgtggcaattagaaagctgc
agaagctctttgaagccatttttgcttacagtgccaagaactgaaaagcccaatagtcaa
tatacagttacagatttgaaaaagatatattctattgaagaagaaagccttgtagttaat
cctgtaagtccagagtggtgggaaaaagaactaaatctgttggaggcagaaactttggaa
catctgaatatatatttgtgtcatgatgatctatctgctgatgatactaaaatggagata
tttttgcctacaaaagcacttcaatttgagtcatggctagagcataaaagttgttcctca
cctattatacttattaatgagaaatcaacaaatgatcatttattactcccacaaaagatt
tcaaccctggcaaaagaagtaccagacctgtgtttttctgacgactgtatatctgttaaa
agaccaacaaaagaagaaaaaccaaagagtgatctagaattagtttatagaataagccaa
aatgaagaaaatgaagattacttggaacttaactgcacagtaccatctatttaatcatct
tcctctccaaaaattgaaaaatcatcttttaaacaagatagaaaatggaagaatgatgtg
gatcttttgagtgactttattgtgctacgaaataaacatagaacttgcacctcgaagact
gaactcacagtcagtaaagaaaacgatgataaagaagaacattccttgactcttcaagaa
gaaagtcccattgtttgtactaatgaagcccttgagaaaataagtcaggaaaggaaagta
gaccatgtcattgaaattcagccatcagatagccagtgccaagcattctgtctcctagaa
gcagcagctactcctatcttaaaaaaactcgtatgtctctgtactctccctgctgctaac
tggacatttgccactgtcaattttgatgaaacaaggttcctcttaaaggaacaggaaaaa
gtaataagtgatgctattcagcaaggtatgaatgatgaaagagaaatgacattcaagtat
gctgctctcttacatcttctggtaacaattagagatgttcttttaacatgcagcttggac
acagcattgggatatttgtcaaatgcaaaagagatctacaaaagcattttaggctcctat
ctggatgacatttggagacagctggagattgtacagtttgttagggaaaaaaaacctgaa
accaattacaagatacaagaactgcaatgtcagatactaaattggatgcagagtgaacag
cagattaatgtgctgattataataagaatggactcagatggtgagaaacatttactcgtt
aaaatccttaacgaaatggaaggtttaacactgactgtcttacaaaacaaaagaaacgat
tttctggaatctgaaggtgttttaaatggtacaagttcctgtgtagttgtacataatcaa
tatattggagcagatttcccctggagtaacttctcatttgtggtggaatacaattttgta
gaaaactcttgttggactaaacactgcaagaaattgaatattcctcacacagcctttaaa
gtggttcttccagacacagtattaaagagaagcaccttgctggatagttttggtggtttt
cttttggaaattcaggttccatatgtgttttttgcatctgaaggacttattaatactcca
gaaattcttcagttgctagaatccaactataatatcacactagtggagagaagctgcagt
gagtctctgaaactctttggaggtacagagtgttatgtagtggtgacagttgatgaacac
actgccataattttgcaggacctaaaagaattgaattgtgagaaggcatccgacaatatt
attatgaggttgatggcattatcattccagtacagctattgttggataattttatataac
aaaaaaacattaaactcagagtaccatcttacagaaaaggcacttcatcatctagcactg
atttatgcagctttggtttcatttgggctaaaatcagaagaactggatgtaaagcttgta
attgtcccaggagtggaagaggctgcactgatagttcgacaaattgctgatcacagttta
atgacctcgaagagagatcctcatgaatggttggaaaaatcctggcttgaagtttcacca
tctaaggaagaaatgtacttacttgactttccatgcattaacccattggtggctcagctc
atgttaaataaaggaccatcactgcactggatattattagcaactctttgtcaacttcag
gaacttttacctgaagttccagaaaaagtgttaaagcatttttgtagcatcacttcctta
ttcaagattagttcttcttccataacaaaatcacctcaaattccatcacctcaggaaaat
gggaatcaggctagtacctttacctcccagagttcagcttctggctcttcaaactctgtc
tttcaagaacctaatgaatattaccagtattcagacataggagccacagtacacaaagac
acaaacatcacttcaaactataactcttcccttacggaactcagaggaaagccatgcatt
ttatcacctgtgaattcttataatcaggccagctactggagagactccagttgtaacctt
aacatagtacataatcatttcctgattaatacagaatcaaggaacatggctggtaattcc
tttcaaaactggaatgattcagagtcagatggtttttctttggatctgacacaaatgaac
tgtgaaaatataatatcgccaattgatactcagaagaaaattgtccctggttttataaat
aatcagaaaaagggaacacatgttgcaaaaagacctataaataaagaagtatatacccct
aacttttcactagaaggctcgcaatctcgtcttccatggagcttcaagaaaaatgtatgg
gaacaacagaatcactcattcaacttagaatatggtgaagagcagactacatgtgacaaa
tggtactctcagaaagataatttacttgctaatcagcagaaatgtctatcggatgagtta
gaaagcttccttcatcaaagttcaaatgctgggactaaaaagactttctgcagagaatta
ccatctgtccccagtttggacttattttgcacttcggatcctaatgtaaatcaaaaagaa
ttcaccagtctttatttccaccaaagagctgggaaatgtttaggacagaaacggcactct
gaatcctcacctaactcaggagacaaaaaatcattaccagatttcacgtgctcacaacta
ccacaattcaaaaaacggcgtctagtgtatgaaaaagtccctggtagagttgatggacaa
actcgtctgaggtttttttga
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