Hyaena hyaena (striped hyena): 120238094
Help
Entry
120238094 CDS
T07257
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120238094 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhv04131
]
120238094 (VPS8)
Membrane trafficking [BR:
hhv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120238094 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
zf-RING_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR3_1st
Beta-prop_WDR5
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
120238094
NCBI-ProteinID:
XP_039097615
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSLCAKTAEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEEESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGNTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDANK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVISPPLNAGRTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLKPCKAAELVATHFSEQIETVVKKLQNQVLLFKFLRSLLDPREGIHVNQE
SLQMSPSVTEQFIELLCQFDPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLKRLQSKLQEITHQDEKAKEDLSLKEVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSGSAAPHLHPEALRSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGQTRWTCYKCSSSNKVGKLSE
NSSEIKKGKTASSQVKMSPPCHPSKGDPAVKKAASEPVLDPQQIQAFDQLCRLYRGSSRL
ALLTELSQNRSSDSYRPFSGSQSGPAFNSIFQNENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaccagaccatgaaaatgtggaacagagcctctgtgccaagactgctgaa
gaagaactgaataagtctttcaatcttgaagcttcgctttcaaaattctcttacatagat
ctggacaaggaactggaattcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgacacgcctccaacgctggaaagcatactcaacgagactgatgatgaagaggag
tcttttgtcctggaggaccctacattgttaaacattgatactattgattctcactcctat
gatacttcatctgtggcaagttcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgcgactctgtctggggaacactagtgttggaggtcagtacgga
gccatctctgccctgagtatcaacaatgactgctcaagacttctctgtggctttgctaag
ggacagatcacaatgtgggatttggccagtggaaaacttctaagatcaataacagatgct
catcccccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatt
tgcaatgacagtggaggctctgtttttgaattgacatttaagagagttatgggagtgaga
acatgtgaatctcggtgtctgttcagtggttccaagggtgaagtttgctgtattgagcct
ctccattctaagcctgagttgaaagatcatcccatcacacagttttccttattggccatg
gcatccttaacaaagatactggtcattggattgaaaccatccttgaaagtgtggatgact
tttccctatggacggatggatccttccagtgttccactgctggcttggcactttgtggca
gtgcataattatgtgaatcccatgcttgccttctgcaggggagatgttgttcattttctg
ttggtgaagagagatgagtctggagcaatacatgttacaaagcaaaagcatcttcacctc
tactatgatctcatcaacttcacttggataaactcacgcacagttgtgctcttggacagc
gtggagaagttgcatgtgattgatcggcagactcaagaggaattagaaactgtggagatc
tcagaagttcagttggtctataatagcagccatttcaaatccctagccaccggaggaaat
gttagccaggcgctggctttggttggagagaaggcttgttatcagtccatcagtagttat
ggtggtcagatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctgg
agagagagagtggatcatctcctgaaacaagattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgccaacaag
cgaaaggctgttgttgcagatcggatggtagaaatcctattccactatgcagatcgagct
ctgaaaaagtgtccagaccaaggaaaaatccaagtgatggagcagcattttcaggacatg
gtgcctgtcatagttgattactgcctgctgctacagcgaaaggatcttttatttagccag
atgtatgacaaattaagtgagaattcagtggctaaaggagtgtttttggagtgccttgag
ccttatattttaagtgacaaattggtggggatgaccccccaggtaatgaaagacttgatt
gttcatttccaagataagaagttaatggaaaatgtggaagctcttattgtacatatggat
atcaccagcctagatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgat
gctatgatctatgtttacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcatttctcctcctctgaatgctggaagaacactaacagatgagcaagttgtt
atgggcaacaagctgcttgtatatattagctgttgtctagcaggccgagcctatcccctc
ggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgatt
cgcctgcattcagcggaagcctcccctgaggaagaaatctacccctatgttcggacgctg
ctacattttgacacaagagaatttctaaatgtattggcactgacttttgaagattttaaa
aatgataagcaagctgtagaatatcaacaacgaattgtggatattttgttgaaagtgatg
gtggagaattcagattttactccctcacaagtagggtgtctctttacattccttgcccgg
cagcttgcaaagcctgacaataccttgtttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgcagtcctgatgatgattcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcagtttgaagagagtcggctcatccgcatggca
gaaaaagcagagttctatcaaatttgtgagtttatgtatgaacgagaacaccagtatgac
aaaattattgattgctacttacgtgatccactgagggaggaagaagtctttaactacatt
cacaatatcttatccattcctgggcacagtgcagaggagaagcagtctgtatggcagaaa
gcaatggatcatatcgaggaacttgtatccctgaagccctgtaaagctgcagagctggtt
gctactcacttttctgaacagattgaaacagtcgttaaaaaacttcagaaccaggttttg
cttttcaaatttttgaggagtcttcttgacccaagggaaggcattcatgtaaatcaggag
tcgttgcagatgtctccctctgttacggagcagttcattgagctgttgtgtcagttcgac
ccaaaccaggttatagagacgctgcaggtccttgagtgctaccgcctggaagaaaccatc
cagattacccagaaatatcaacttcatgaagtcactgcctatctattagagaaaaaagga
gatattcatggtgccttcttaataatgctaaagagactacaaagcaaacttcaggagata
acacatcaagatgaaaaagccaaagaagatctctcattgaaggaggttgaagataccatg
gtagagacaattgccctttgccagagaaattcacacaatttgaaccagcagcaacgagag
gcactctggtttccattattggaggcaatgatggcccctcagaagctgtctgggtcagct
gcacctcatctacaccctgaagctctgagatctctgaccatgcaagttctaaacagcatg
gcagctttcattgcccttccgtcaatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgttggatacctttaactat
gagcaaactctgctggaaacaactactagccttctaaaccaagatctccattggtcattg
tgtaacctgagagcttcagtcaccagaggactgaatcccaagcaggattattgctccata
tgtttgcagcagtataagagacgccaagaaatggcagatgaaatcattgtctttagctgt
ggccatttgtatcactcattctgtctgcaaaacaaagagtgcaccatagaaactgagggg
cagacaagatggacgtgctacaaatgcagctcaagtaacaaagtagggaaattaagtgaa
aattcatctgaaattaaaaaaggaaagacagcctcatcacaggtaaaaatgtctcctcct
tgtcatccatccaaaggggatcctgctgttaagaaggcagcctcagaacctgttctggac
ccacagcaaatccaagcgtttgatcagctttgccgtctctaccgaggaagttcccggctg
gccctccttacagaactctcccagaatcgcagcagtgacagctacaggccgttcagtggc
tcccagagtggccctgctttcaacagcatcttccagaatgagaacttccagctgcagctc
attcccccgcccgtgactgaagactga
DBGET
integrated database retrieval system
