Hyaena hyaena (striped hyena): 120238449
Help
Entry
120238449 CDS
T07257
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
hhv
Hyaena hyaena (striped hyena)
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhv04131
]
120238449 (VPS13A)
Membrane trafficking [BR:
hhv04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120238449 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Spo16_N
Motif
Other DBs
NCBI-GeneID:
120238449
NCBI-ProteinID:
XP_039098102
LinkDB
All DBs
Position
Unknown
AA seq
3172 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLTIPWKNLYTQPVEAVLGDIYLLIVPSSKIKYDPVKEEKQLLEAKQYELKRIEE
AKQKVADQEKHLVEKPDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQFWVPCLHDETEKLFRKLIRLDNLFAYWNVKSPLFYLNDYDESLDSLKNGIV
RENIVPKGYDFVFRPISANAKLQMNRRSDFDFSAPKINLEVELHEIAIEFNKPQYFSVME
LLESVDMMTQNLPYRKFKPDVPLHYHAREWWSYAIHGILEVNVCPRLRMWSWKYIREHRQ
KMKQYKELYKKKITTKKPTGELLISLQELEKTLDVFNITISRQQAEVEVKKAGYRIYREG
AKDAEENKGWFSWLWTWSEPKSKEQPDVKPGILEEMLTPEEKVLLYEAIGYSETAVDPTL
PKTFEAMKLFVHLKSMSIVLREKRETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDATSLFQIVFEINPIDETAAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSATLMKLEEFRDKTATGLLYIIETQKVLDLKINLKASYIIIPQD
GIFSPTSNLLLLDLGHLKVTSKSRLELPDMKQGGAKLEEIMHRAYDSFDVQLTSIQLLYS
TVGDNWKEARKLNVSTQHILIPMHFNVELAKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPATETYAPVKPLQIQRSTSLGTSQISQKMLPFLELPCVEDDSDEE
FFDAPCSPLEEPPQSPTGVKSCQQKKFQKSDCTKNMIQYKIRFEVPEVLIQFYHLVGDCE
LPVVEIDVLGLGTDVELRTFDLKASAFLKEFCLKCPEYFDENKKPVYLVTTLDNTMEDLL
TLEYVKAEKNLPNLKSTYNNVVQLIKVNFSSLDIHLHTEALLNTINYFNNVFPQLEEKRA
SVSVAETEDKGEVIKKMSLKLSKNEDIITLQILAELSCLQIFIQDQKRNISEIKIEGLDS
EIIMRTSATEINAKLRNIIVLDSDKTALYKKAVYITGKEVFSFKMVSFVDATAGPAYTDM
DVVDVQVNLTVGCIEVVFITKFLCSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQ
RSSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITECESNPPPIIDLITI
RLSEMRLYRTQFIDDTYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFI
LSQEDLTTIFKTLHGNIRYEEGYGASPAGVKDQQSITGGTTTASPHLQGTTVVTAAVVEV
HSQASQVKTTLNMSFKTDYLTMILYSPSPEQTSFKDVRDPALKLAEFKLENIISTAKMYT
DDSIFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRKVRDGLVTDLVLQ
EMYICASVEFLLTVANVFLEAYTTGSAVETSVQTWTTKEEVPVQEKEKWEINIIIKNPEI
VFVADMTRSDAPALVITTQCEICWKGDRENSTMTAAIKDLQVRACPFLPVKRKGRITTVL
QPCDLFYQATQIGANPQVIDISVKSLTLKVSPVIINTVITITSALYTSKETIPKDTVSST
AHLWEKKDTKSLKMWFLEEPHEVENKAPTTELILRGETLRVNIDSIFIVLEAGVGHRTVP
MLLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLG
IKMKKKAKKAIVESDTEEENYKVPEYKTVITFHSKDQLNITLSKCGLVMLNNLAKAFTEA
ATGTSAAIIRDLAPFMILNSLGLTVSVSPSDSFSVLNVPLAKSYVLKNEESLSMDYVGTK
DNDHFNAMTSLSSKLFFVLLTPTNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQVDG
VEGSKKVTIRSPVQVKNHFSIPLSVYEGDTLLGTASPGSEFNIPLTSYRSPLSLKPDDED
YQVCERIDFEEIIKNEGTLLKKRCRSINTTKKPFIINVVPEKDNLASLSVYSEDGWDLPY
ILHLWPPILLRNLLPYKIAYYIEGIEHNVYTLNEGRSAHICTAQLDKARLHLKLLDYLNH
DWKSEYYITPNQQDISFINFTCVTEIEKTDLDIAIHVTYNIGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKKPILFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAV
KCKGQKMEYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYHISVAEEGNDKWLSLDLEQC
VPFWPEDASNALLIQVERNQGPPKKIHFNKQENCILLRLDNELGGIIAEVNLAEHSTVIR
FSDYHDGAATFLLINHTKTDIVQYNQSSLSEIEDSLPPGKAVFYTWADPVGTRKLKWRCG
KSHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKATYESEKAELAEQE
IVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFKE
YTESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSF
RIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKY
FKVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEVELFHKDIEAFQEEYKTASLVDSSQV
SLYEYFHISPIKLHLSVSLRSGREEAKDSEKQEGLMAVHSLNLLLKSIGATLTDVQDVVF
KLAFFELNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAF
FYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASRITNAMAKGVAAMTMDEDYQQ
KRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLV
GAVARPTGGIIDMASSTFQGIKRATESSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQML
QVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFI
VHGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRF
NT seq
9519 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggatgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaatgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttacaattccatggaaaaacctctacactcaaccagttgaa
gctgtcctgggagacatttatttactcatagtgccttcttctaaaataaaatacgatcct
gtaaaagaagaaaaacaactcttggaagcaaagcaatatgaacttaaacgaatagaagaa
gcaaagcaaaaagtagctgatcaagaaaaacatctggtggagaaaccggacactttcaca
gaaaaattaattacacagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttatgaagatgatatcacaaatcgagacaatccactgtcattcggtatttcccttcaa
aatctcagcatgcagacaactgatcaattctgggttccatgtttacatgatgaaactgag
aaactcttccgtaagttaatccgattggataacctttttgcctattggaacgtgaagtct
ccgttgttttaccttaatgattatgatgaatcattggacagcttgaagaatggcattgtc
cgtgaaaatattgtcccaaaaggttatgattttgtgtttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcggattttgacttttctgctcccaagataaacctggaa
gttgagttacatgagatagcaattgaatttaataaaccacagtatttcagcgttatggag
cttcttgagtcagttgatatgatgacacagaatctaccctacaggaaattcaaacctgat
gtgcctcttcactatcatgccagagaatggtggagttatgctatacatggtattctggaa
gtaaatgtctgcccccggttacggatgtggtcatggaagtatattagagaacacaggcaa
aaaatgaagcagtataaagaactttataaaaaaaagataacaactaagaagccaactggt
gaactactcatctctttgcaggagttggaaaagaccttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggtaaagaaagctggatacaggatttacagagaagga
gcaaaagatgcagaggaaaataagggatggtttagctggctgtggacttggtcagaacca
aaaagtaaagaacagccagatgtgaagcctggaattcttgaagaaatgttgacacctgaa
gaaaaagttttactctatgaagcaattggctacagtgaaacagcagttgatccaaccttg
cctaaaacatttgaagccatgaagttgtttgttcacttgaaaagtatgtctattgttcta
agagaaaagcgagaaacacctgaactgttagatattgtagtggaagaatttagcactttg
attgtgcaaagaccaggagcacaagcaattaaatttgaaaccaaaattgattcatttcat
gttactggcttaccagataattcaacaaaacctcgcctcctttcttcattggatgatgct
acgtcactcttccaaattgtattcgagataaatccgatagatgaaactgctgctcaaagg
tgtatcatagaagctgaacctctagaaatgatatatgatgctagaacggtgaatagtatt
gtggaatttttcagacctccaaaagaggtaaatctagcacagcttacttcagcgacattg
atgaaacttgaagaatttcgtgacaagacagcaacaggtctactatatattatcgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcttcatacattattatcccacaagat
ggaatttttagccctacgtcaaacctacttcttttggatcttggtcatctaaaggtgaca
agtaaaagtcgtttggaattaccggatatgaaacaaggtggagccaaacttgaagagata
atgcatagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggtgataattggaaagaagctcgaaaacttaatgtatctacacaacatattttg
atacctatgcacttcaatgtggaacttgctaaggccatggttttcatggatataaggatg
cccaaattcaagatttttggaaagttaccactgatttctttacgaatctcggataaaaaa
ctgcaagggattttggaattgattgaaagcattccaaaacccacacctgcaactgaaaca
tatgcccctgtcaaaccacttcagattcagaggtcgacttctttgggaacatcacagatt
tcacagaaaatgcttcctttcctggaacttccgtgtgttgaagatgattcagacgaagaa
ttttttgatgcaccgtgtagtcctttggaagagcctcctcagtctcccactggagttaaa
agttgtcaacagaagaagtttcaaaagtcagattgtacaaaaaatatgattcagtataaa
ataagatttgaagtgccagaggttttgattcagttttatcaccttgtcggagattgtgaa
ctacctgtggtagaaattgatgttttaggattgggcacagatgttgaacttcgaacattt
gatttgaaagcaagtgcctttttgaaagagttctgcttaaaatgcccagaatactttgat
gaaaacaagaaaccagtttatttggttacaacactggataatacgatggaagatctgcta
acactggagtatgtgaaggcagaaaagaatctacctaatttgaaaagtacttataacaat
gttgtacaactaattaaggtgaacttttcctctttggatattcatttacatactgaagca
cttctgaatacaataaattattttaataatgtattcccacaactggaagaaaaacgagcc
tcagtgtctgttgcggagactgaagacaaaggagaggtcattaaaaaaatgtctttaaaa
ctatccaagaatgaagatattattaccttgcagattttagcagaattatcttgtttacag
atcttcattcaagatcagaaacgtaacatttctgaaattaagattgaaggacttgattct
gagataattatgaggacttcagccactgaaataaatgcaaagctaaggaatataattgtc
ttggattctgataaaacagctttatacaaaaaggccgtttacatcactggaaaagaagtt
ttcagcttcaaaatggtttcttttgtggatgcaactgctgggcctgcttacacagatatg
gatgtggttgatgttcaagttaatttaactgttggttgcattgaagtagtttttatcaca
aaatttctatgttctatattggctttcatagataattttcaggcagctaaacaagctttg
gctgaggccactgttcaggcagcaggaatggcagccactggtgtgaaagaactggcacag
aggagttctagaatggcattggatgttaacatcaaagccccagtggtggtcatcccacag
tctccagtttctgaaaatgtttttgttgctgactttggactaattacaatgacaaataca
ttccatatgataacagagtgtgagagcaaccccccacccattattgatttgataacaata
cggctgagtgaaatgcgactgtacaggactcaatttattgatgatacataccaagaagta
ctggatctgctactgccattaaatcttgaggtgattgttgagcgaaatttatcttgggag
tggtaccaggaagttccttgttttaatgtaaatgctcagctaaagcccatggagttcatt
cttagtcaagaagatttaacgactatttttaaaacattacatggcaatatacggtatgaa
gaaggctatggtgcctctcctgcaggagtcaaagatcaacaaagtattactggtggcact
actactgcttcaccccatttacaaggaacaactgtagtgacagctgctgtggtagaagta
cattcacaggcctctcaagttaagacaacgctaaatatgagtttcaaaactgattatctc
accatgatactgtatagtccaagtcctgagcagacttcctttaaagatgttcgtgatcct
gctctgaaacttgctgaatttaagttggagaatattataagtactgcaaagatgtataca
gatgactccatattttcttccttctcattaaaaaactgtattttagatgataaaagacct
catgtaaagaaggcaactcctagaatgataggactgacggttgggtttgacaaaaaggac
atgatggatgtaaagtataggaaagtcagagatggtttggtgactgacttagtccttcaa
gaaatgtatatttgtgccagtgtggaatttctgctgacagttgcaaatgtctttcttgag
gcctacaccacaggctcggctgtagaaaccagtgttcagacatggactactaaggaagaa
gtacctgtacaggaaaaagagaagtgggaaattaatattattattaaaaatcctgaaatt
gtgtttgtggctgatatgacacgaagtgatgctcctgccttagtcattacgacacagtgt
gagatttgttggaaaggtgaccgtgagaacagtacgatgactgctgccattaaagatctt
caagtgagagcatgcccatttcttccagtcaagagaaaaggcagaatcactacggttttg
cagccctgtgacttattctatcaagctacacaaataggtgcaaatccacaagtgattgat
atatcagtaaaatccttgaccctaaaggtttcaccagttatcataaatactgtgattacc
ataacatcagccctgtatacatctaaggaaaccatcccaaaagataccgtttcttctaca
gcacatttatgggaaaagaaggatactaagagtttaaaaatgtggtttcttgaagaacca
catgaagttgaaaacaaagctcctacaactgaattgatactcagaggagagacattaaga
gtgaacattgattctatttttatagttcttgaggctggagttggtcatagaacagtgcct
atgctgttggcaaagtcacgtttttcgggggaaggcaaaaactggagttccttgataaat
ctgtactgtcagcttgaattagaagtacattattacaatgaaatgtttggtgtatgggaa
cctttgcttgaacctttagaaattgatcagactgaggattttagaccatggaatcttgga
atcaagatgaaaaagaaagcaaaaaaggccattgttgagtcagatactgaagaagaaaat
tacaaagtgccagaatataaaaccgttatcactttccattcaaaagaccaactaaacatt
acattatccaaatgtggccttgtaatgttaaataatttagccaaggcatttacagaagct
gccaccggaacttcggctgccatcatacgagatctagcaccgtttatgattttaaattct
cttggacttactgtctctgtttcaccaagtgattcttttagcgtactcaacgttccgttg
gcaaaatcctatgtactgaaaaatgaggagagtttaagtatggattatgtgggaactaaa
gacaatgatcatttcaatgcaatgacaagcctaagcagtaaactcttcttcgttcttctt
acacccactaaccactctactgcggataaaatccctttaacaaaagtgggacgacgacta
tacactgtaagacacagagagtctggagttgaaagatctattgtttgtcaagttgatgga
gtggaaggaagtaagaaggtaacaattcgctccccagtgcaggttaaaaatcatttttca
atcccactttctgtttatgaaggggacactttattgggaacagcttcacctggaagtgaa
ttcaatataccattaacatcttaccgatcgcctctttctctgaagccagatgatgaggac
tatcaagtgtgtgaaagaattgactttgaagaaattattaaaaatgaaggcactcttcta
aagaagagatgtagatctataaacactactaagaaaccctttattattaatgttgtccct
gaaaaagataatttggcatctctctcagtgtattcagaagatggttgggacttaccatac
atactgcatttgtggccgcctatcctgctccgaaatcttcttccttacaaaattgcttat
tatatagaggggattgagcataatgtttatactctcaatgaaggacgttcagcccatatt
tgtactgcccagttggataaagccagactacatttgaaattacttgactatcttaatcat
gattggaaaagtgaatattatataacacctaatcagcaggatattagtttcatcaatttt
acctgtgttacagaaatagaaaagactgatttagatattgctatccatgtaacctataat
attggccagacagttgtcgcatttcatagtccttattggatggtcaataaaactggtcga
atgttacagtataaagcagatggaattcatcgaaagcatccacctaattacaaaaagccc
attctcttttcttttcaaccaaagcacttttttaataacaataaggttcagcttatggta
actgatagtgaattgtcagatcagttttcaattgatactgttgggagtcatggagctgtt
aaatgtaaaggccagaaaatggagtatcaagttggtgtcactatagacctcagcagtttt
aacatcaccagaattgtgacttttacccctttttatatgattgaaaacaaaagcaagtat
catatatcagtggctgaagagggaaatgataaatggctctctctcgatttagagcagtgt
gttcccttttggcctgaggatgcttctaatgcactcctcattcaagttgaaagaaatcaa
ggccctcccaaaaagatacattttaacaagcaagaaaactgtattttattgcgtctggat
aatgagcttggaggtattatagcagaggttaatttggctgaacattctacagttattaga
ttttcagattatcatgatggagcagctacattcctgttaataaatcacaccaagactgac
attgttcagtataaccaaagttctctcagtgaaatagaagattccctccctcctggaaaa
gcggtattttacacctgggctgatccagtgggcactagaaagctgaagtggagatgtgga
aaaagccacggagaagtgacgcaaaaggatgatatgatgacacctataaatttggggaaa
aagaccatttatttagtttcattctttgaaggcttacagcgtattattttattcaccgaa
gatccaagggtatttaaagcaacgtatgaaagtgagaaagcagagttggcggagcaagaa
attgtgttggccttacaagatgttggaatttcccttgtcaacaattacacaaagcaagaa
gtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaag
gcaagatggaagccaatgagtgtaaagcacacggagaagttagagaaagaatttaaggaa
tatactgaatcttcgccttcagaagataaggttattgagttggacactaacattccggtt
cgcttcacacctagtggtactaacatgaaaattcttcaaccacatgtaatagctatacga
agaaattaccttccagcattaaaagtagaatatagcacatctgcacatcagtcatcattt
agaattcaaatttacagaatacagatccaaaaccagatacatggtgctatatttcctttt
gtgttttatccgattaaacctcccaagtcggtcaccatggattcagctccaaagcccttt
acagatgtcagtattgtcatgagatctgcaggccattctcagatttcacgtattaagtac
ttcaaggtgttgatccaagaaatggatctcaggttagatcttgggtttgtctatgcttta
gcagaacttatgacagaagcggaagtaactgaaaaaacagaggttgaactttttcataaa
gatatagaagctttccaagaagaatataaaacagcttcattagtagattcatcacaagtc
agcctctatgaatactttcatatatctcccatcaagttgcacttaagcgtttcactgcga
tccggtagagaagaagctaaagattcagaaaaacaggaaggactgatggcggttcattcc
ttaaatcttttgctgaagagtattggtgccactcttacagatgtgcaagatgtggttttt
aagcttgcattttttgaactcaactatcaattccacacagcatctgaactacaatctgaa
gtaataagacactattcaaaacaggccattaagcaaatgtatgtactcattcttgggctt
gaagttttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcattt
ttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaggggatggcc
ctaggactgaaggcactagttggtggagctgtcggtggattagctggtgctgcctccaga
atcacaaacgctatggctaaaggggtggcagctatgactatggatgaagactaccaacag
aagagaagagaagctatgaataagcaaccagctggtcttagagaaggcatcactcgtgga
ggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaaccaatc
aaaggggctcaaaaagaaggagcagctggtttcttcaaaggtgttgggaaaggtttagtt
ggagcagtggcaaggccaactggaggcatcatagacatggctagcagtacatttcaggga
ataaaaagagctacagagagttctgatgaagtggagagcctgcgaccccctcgattcttt
aatgaggatggagtcatcagaccttacaggttgagggatggtactggcaaccaaatgtta
caggtcatggaaaatggcagatttgcaaagtacaagtattttacccatgtcatgatcaat
aaaacagatatgttaatgataactaaaagtggtgtcttgtttgtaacaaaaggaacattt
ggacagcttacatgtgagtggcagtatagttttgatgagtttaccaaagagcccttcatt
gttcacgggagaagattacgcattgaagcaaaggaacgagtgaagtctgtatttcatgcc
aaagagtttggaaaaataattaacttcaagaccccagaagatgctaggtggatcctcacg
aaactagaagaagcaagagaaccttctccgagattctga
DBGET
integrated database retrieval system
