Hyaena hyaena (striped hyena): 120238587
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Entry
120238587 CDS
T07257
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv04151
PI3K-Akt signaling pathway
hhv04510
Focal adhesion
hhv04512
ECM-receptor interaction
hhv05165
Human papillomavirus infection
hhv05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120238587 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120238587 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120238587 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
120238587 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
120238587 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hhv00536
]
120238587 (TNR)
Glycosaminoglycan binding proteins [BR:
hhv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120238587 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
EGF_2
Motif
Other DBs
NCBI-GeneID:
120238587
NCBI-ProteinID:
XP_039098318
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MGVDGETVVLKNMLIGVNLILLASLFKPSECQLEVTTERVQRQAVEEAGGVANYNTSGKE
RPMIFNHVYNINVPLDSLCSSGLEASAEQEVSAEDEALTEYTGQTSDHESQVTFTHRINL
PKKTCPCAGSARLLQELLSRIEMLEREVSVLRDQCNNNCCPESAATGQLDYIPHCSGHGN
FSLQSCGCICNEGWIGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGGDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCSELRCPGDCSGKGRCVNGTCLCQEGYVGEDCGQQRCLNA
CSGRGHCQEGLCFCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPRG
LHFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVWVSAVRGTNESQSTTTQFTTEIDAPKNL
RVGSHTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHEMLVPKSIGPTTRATLTNLVPGT
EYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKANGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSFESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMTEISLEATKRHTVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLIHTAMDNPVDLI
ATNITPTEALLQWKAPVGEVENYVIVLTHFAVAGETILVDGGSEEFQLVGLLPSTHYTVT
MYATSGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYILTYKSADG
SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDTARSSLTSATFTTGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSRKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDGRNLYKLRLGVY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYSHRLTAGRKRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggacggggaaacggtggtcctgaagaacatgctcatcggggtcaacctgatc
cttctggcctccctgttcaagccctccgagtgtcagctggaggtcaccaccgaaagggtc
cagagacaggcagtggaggaggcaggaggtgttgccaattacaacacatccggcaaagag
cggccgatgatcttcaaccacgtgtataacattaatgtgcccctggacagcctctgctcc
tctgggctggaggcctcagccgagcaggaggtgagtgccgaagacgaggcattgacagag
tacacgggccagacctcagaccacgaaagccaggtcaccttcacccacaggatcaacctc
cccaaaaagacctgcccatgcgccggctcggcccggctactgcaggagctgttgagccgg
atcgagatgctggaaagggaggtgtcagtgctacgggaccagtgtaacaacaactgctgt
ccggaaagcgcagccacaggacaattggactatatccctcactgtagcggccatggcaac
ttcagcctccagtcctgcggctgcatctgcaatgaaggctggatcggcaagaactgctct
gagccctactgccccctgggctgctccagccggggagtgtgtgtggatggccagtgcatc
tgcgacagcgagtacagcggaggcgactgctcagagctccggtgcccaaccgactgcagc
tcccgggggctctgtgtggacggggagtgtgtctgcgaagagccctacacgggcgaggac
tgcagcgagctgcggtgccctggggactgttcagggaaggggagatgtgtcaatggcacc
tgcctctgccaagagggctacgtgggtgaggactgcggccagcagcggtgtctgaatgcc
tgcagtgggcgaggacactgccaagaggggctctgcttctgtgaagagggctaccagggc
cctgactgctcggcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcagcgggtacctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctctctacccctcgaggg
ctacacttcaagaccatcacagagaccactgtagaggtgcaatgggagcccttctcattc
tccttcgatggatgggagatcagcttcattccaaagaataatgaaggaggggtgattgct
cagctccccagtgatgttacatccttcaatcagacaggactaaagcctggggaggaatac
attgtcaatgtggtggctctgaaagagcaagcccggagcccccctacctcggccagcgtc
tctactgtcattgacgggcccacacagatcctggttcgagatgtctcggacaccgtggcc
tttgtggaatggaccccaccgcgagccaaagtcgacttcatcctcttgaagtatggtttg
gtgggcggggaaggtgggaagaccactttccggctccagccccccttgagtcaatactca
gtgcaggccctgcgacccggttcgcgctatgaggtgtgggtcagtgccgtccgtgggacc
aacgagagccaatccacgaccacccagttcacaacagagatcgacgcccccaagaacctg
cgggttggctcccacacggcaaccagccttgatctcgagtgggacaacagcgaagcagag
gtccaggagtacaaagttgtgtacagcaccctggcgggtgagcagtaccacgagatgctg
gtccccaagagtatcggtccaaccaccagagccaccctcacaaatttggtgcctggcaca
gagtatggagttggaatatctgctgtcatgaactcacagcaaagtgtaccagccaccatg
aatgccaggacagaacttgacagtccccgagacctcatggtgacagcctcctcagaaacc
tccatctccctcatctggaccaaggccaacggccccattgaccactaccggattacattt
accccatcttctgggattgcctcagaagtcactgtccccaaggacagaacttcgtacaca
ctgacagatctagagcctggggcagagtacatcatttcaatcactgctgagaggggtcgg
cagcagagcttcgaatccactgtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcatgtgacctcctccagtgtaaacataacctggagtgacccatcccctcca
gcagacagactcattctgaactacagccctcgggatgaagaggaagagatgacagagatc
tccctggaagctaccaagaggcacactgtcctgatgggcctgcagccagccactgagtac
atcgtgaacctggtggcagtccacggtacagtgacctctgaacccattgtgggctccatc
accacaggaattgatccccccaaagacatcacaattagcaatgtgaccaaggactctgtt
atggtctcctggagccctcctgttgcatcttttgattactaccgagtatcgtatcggcca
acgcaagtgggacggctggacagctcagtggtgcccaacacagtgacagaattcaccatc
accaagctgtatccagccaccgaatatgaaataagtctcaacagtgtgcggggcagagag
gagagtgagcgcatctgcaccctcattcacacagccatggacaaccctgtggatctgatt
gccaccaacatcactccaaccgaagccctactgcagtggaaggcaccagtgggtgaagtg
gagaactatgtcattgttctcacacactttgcagttgctggagagaccatcctggttgat
gggggcagtgaggaattccagcttgttggcctgctccctagcacccactatactgtcact
atgtatgccaccagtggacctctcaccagtggtaccatcagcaccaacttctctaccctc
ctggatcctcctgcaaacctgacggccagtgaagtcaccagacaaagtgctctgatctct
tggcagcctcccagagcagagattgaaaactacatcttaacttacaaatctgccgatgga
agccgcaaggagctgattgtggatgcagaggacacgtggatccgactggagggtctgtct
gagagcacagactacacggtgctcctgcaggcggcccaggacactgcccggagcagcctc
acgtctgccaccttcaccacagggggccgggtgtttcctcatcctcaagactgtgcccag
catttgatgaacggagacactctgagtggggtctacaccatcttcctcaatggagagcta
agccggaagctacaggtgtactgcgatatgaccaccgacggaggtggctggattgtattc
cagaggcggcagaacggccaaactgattttttccggaaatgggcggagtaccgtgttggc
ttcgggaacttggaagatgagttttggcttggactggacaacatacacaggatcacatcc
cagggccgctatgaactgcgtgtggacatgcgcgatggccaggaggccgccttcgcctac
tacgacaagttctctgtggaggatggcagaaacctgtacaaactgcgcctgggagtctac
aatggcaccgcaggggactccctcagctatcaccagggacgccctttctccactgaggac
agagacaatgatgtcgcagttaccaactgtgccatgtcgtacaagggggcctggtggtac
aagaactgccaccggaccaatctcaatgggaaatatggagaatccaggcacagtcagggg
atcaactggtaccattggaaaggccacgagttctccatccctttcgtggaaatgaagatg
cgcccctacagccaccgtctcacagcagggaggaagcggcggtccttgcaattctga
DBGET
integrated database retrieval system