Hyaena hyaena (striped hyena): 120239042
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Entry
120239042 CDS
T07257
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv04151
PI3K-Akt signaling pathway
hhv04510
Focal adhesion
hhv04512
ECM-receptor interaction
hhv04518
Integrin signaling
hhv04974
Protein digestion and absorption
hhv05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120239042 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120239042 (COL2A1)
04518 Integrin signaling
120239042 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120239042 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
120239042 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
120239042 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hhv00536
]
120239042 (COL2A1)
Glycosaminoglycan binding proteins [BR:
hhv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120239042 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
120239042
NCBI-ProteinID:
XP_039099066
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGTPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgccgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacccggtgacatcaaggatatcgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggggatcgtggtgacaaa
ggtgaaaaaggtgcccctggaccacgtggcagagatggagagcctgggacccctggaaac
cctggcccccctggtcctcccggcccccctggcccccctggccttggtggaaactttgct
gcccagatggctggcggatttgatgaaaaggctggcggcgcccagatgggagtgatgcaa
gggccaatgggccccatgggacctcgagggcctccaggccctgctggtgctcctggacct
caaggatttcaaggcaaccctggagagcctggggaacccggtgtctccggtcccatgggt
ccccgtggtcctccgggcccccctggaaagcctggcgatgatggtgaagctggaaagcct
ggaaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccgggaacc
ccaggcctccctggtgtcaagggtcacagaggctacccaggtctcgatggtgcaaaggga
gaagctggtgccccgggtgtgaagggtgagagtggctcaccgggtgagaatggttctccg
ggcccaatgggtccccggggcctgcctggtgagagaggacggactggccccgctggggct
gcgggtgcccggggcaacgacggtcaaccaggccctgctgggcctccgggtcccgtgggt
cctgctggcggtcctggcttccctggtgctcccggtgccaagggcgaagctggccccacc
ggtgctcgaggtcccgaaggcgctcaaggtcctcgaggtgaacctggtactcctgggtcc
cctggaccggccggtgcctctggtaaccctggaacggatggaattcctggagccaaagga
tctgctggtgctccgggcattgctggtgctcccggcttccctgggccccgtggtccacct
ggccctcaaggtgcaactggtcctctgggcccgaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagagcctggccctgctggcccccaagga
gcccctggtcccgctggtgaagaaggcaaaagaggtgcccgtggagagcccggtggtgct
gggcccgttggtccccctggagaaagaggtgctccgggcaaccgtggcttcccaggtcag
gatggtctggcaggtccaaagggagcccctggagagcgagggcccagcggccttgctggc
cccaagggtgccaacggtgatcctggccgtcccggagagcctggccttcctggagcccgg
ggtctcactggacgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggccgccctggccctccgggtcctcagggtgctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaatggcgagcctggcaaggctggtgagaag
ggactgcccggtgctcctggactgagaggtcttcctggcaaagatggtgagactggagcc
gcaggcccccctggacctgctggacctgctggtgaacgaggcgagcagggtgcccctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcctggcgaagctggagcccccggcctcgtgggtccccggggtgaa
cgaggtttcccaggtgaacgtggctctcccggtgcccagggcctccagggtccccgcggc
ctccctggcactcctggcactgacggccccaaaggcgcctctggcccagctggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggagcagctggcatc
gctgggcccaagggagacaggggtgatgttggtgagaaaggccccgaaggagcccctggg
aaggatggtggacgaggcctgactggtcccattgggccccctggccctgctggtgccaat
ggtgagaagggagaagttggacctcctggtcctgcgggaaccgctggtgctcgtggcgcc
ccgggtgaacgtggagagaccggcccccctgggcccgctggattcgcaggacctcccggt
gctgatgggcagccaggtgccaagggcgagcaaggagaggctggccagaaaggtgatgct
ggtgcaccgggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccctccgggagccaccggattccctgga
gctgctggccgcgttggaccccccggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggccccaaaggtgctcgaggagatagcggcccccctggccgt
gctggtgaccctggcctccaaggtcctgccggaccccctggcgagaagggagagcctgga
gacgatggtccctctggtcccgatggtcctccaggtccccaaggtctggctggtcagcgg
ggcattgttggtcttcctgggcagcgtggtgagagaggattccccggcctgcctggccca
tcgggtgagcctggcaagcagggagctcccggtgcatctggagaccgaggtccccccggc
cccgtgggtcctcctggcctgactggtcctgctggcgaacctggacgagagggaagccct
ggtgctgatggcccccctggcagagatggcgcggctggagtcaagggtgatcgtggtgag
actggtcccgtgggtgctcccggaacccctgggccccctggctctcctggccccgctggc
ccaactggaaagcagggagaccgaggagaagctggcgcacaaggccccatgggccccgca
ggaccggctggagcccggggaatcccaggtcctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggactgaagggacaccgcggcttcactggtctgcagggt
ctgcccggccctcctggtccttctggagaccaaggtgcttctggtcctgccggtccttct
ggccctagaggtcctcctggccccgtcggtccctctggcaaagatggagctaatggaatc
cctggccccatcgggcctcctggaccccgcggacgttcaggcgaaactggccccgctggt
cctcctggaaaccccggaccccctggccctccaggcccccctggccctggcatcgacatg
tctgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcggccggcaacctgagacagcacgacgccgaggtggatgccacactcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccctgcc
cgcacctgccgggacctgaaactctgccaccccgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagacgggc
gagacctgcgtctaccccaacccagcgaatgttcccaagaagaactggtggagcagcaag
agcaaggacaagaaacacatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacacggccaatgtccagatgaccttcctacgcctg
ctgtccaccgagggctcccagaacatcacctaccactgcaagaacagcatcgcctacctg
gatgaagcagctggcaacctcaagaaggccctgctcattcagggctccaatgacgtggag
atccgggctgagggcaacagcaggttcacatacactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgattgagtaccggtcacagaagacctcgcgcctc
cccattattgacattgcacccatggacatcggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
