Hyaena hyaena (striped hyena): 120241029
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Entry
120241029 CDS
T07257
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv01524
Platinum drug resistance
hhv03430
Mismatch repair
hhv05200
Pathways in cancer
hhv05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120241029 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120241029 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
120241029 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
120241029 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhv03400
]
120241029 (MSH2)
DNA repair and recombination proteins [BR:
hhv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120241029 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
120241029
NCBI-ProteinID:
XP_039101880
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAVLPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPAGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKISIVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAASSLSAVIKFLELLSDESNFGQFELTTFDFSQYM
RLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRA
LEKYEGKHQRLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKSQDYGEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITKKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgccgaaggagacgctgcagctggagagcgcggccgaggttggcttcgtg
cgcttcttccaggccatgccggagaagccgaccaccacggtgcgcctcttcgaccgaggc
gacttttacacggcgcaccacgaggacgcgctcctggccgctcgagaagtgttcaagacc
cagggggtggtcaagtacatagggccggcaggaacaaagactctggagagtgttgtactt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcctcgaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctttttggtaacaacgat
atgtcagcttccattggtgttgtgggtgttaaaatatctatagttgatggccaaagacag
gtcggcgttgggtatgttgactccatacagaggaagctaggactttgtgagttccctgat
aatgatcagttctccaatctggaggccctcctaattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatggggaaactgaggcaggttattcagagagga
ggaattctgatcacagaaaggaaaagagctgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaaaggagagcagatgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgaatcaaacttcggacagtttgaactgactacttttgacttcagccagtacatg
aggttggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagacacc
actggctctcagtctctggctgcattgctaaataaatgcaaaacccctcaaggacaaagg
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagacta
aatttagtggaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgatttccagatcttaaccgacttgcgaagaaatttcaaagacaggcagcaaac
ttacaagattgttaccgactctatcaggggataaatcaactccctaatgttattcgggct
ctggaaaaatatgaaggaaaacaccagagattactcctggcagtttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaacattagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatggatgacttggaaaagaagatgcagtcaacattaataagtgcagcg
agagatctaggcttggatcctggcaaacagattaaactggattccagtgcacagtttggt
tattactttcgtgtcacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acagtagatatccagaagaatggtgttaaatttaccaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaactgagtatgaggaagcccaggatgctattgttaaggaa
atagtcaatatttcttcaggttatgtagagccaatgcagacactcaacgatgtgttagct
cagctagatgctgttgtcagctttgctcatgtgtcaaatggagcacctgttccatatgta
cgaccggtcattttggagaagggacaaggaaggattacattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggtcctaacatgggaggtaaatcaacatatattcgc
caaactggggtgatagttctcatggcccagattgggtgttttgtgccatgtgagtcagca
gaagtgtccattgtggactgcatcttggctcgagtaggggctggcgacagtcagttgaaa
ggagtctccacattcatggctgaaatgctggaaacggcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaactgggaagaggaacctccacatatgatggattt
ggattagcatgggctatatcagagtacattgcaacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctgtatcaggtgaagaaaggt
gtctgtgaccaaagtttcgggattcacgttgcagagcttgcaaatttccctaggcatgta
atagagtgtgctaaacaaaaggccctggaactagaggagtttcagaatattggaaaatca
caagactatggtgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagaatttttatccaaggtgaagcaagtgccttttactgaaatgtcg
gaagaaaacatcacaaaaaagttaaaacagctgaaagctgaggtaatagcaaagaataat
agttttgtaaatgaaatcatttcacgaatcaaagttactacatga
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