Hyaena hyaena (striped hyena): 120241198
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Entry
120241198 CDS
T07257
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120241198 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhv03021
]
120241198 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
hhv03019
]
120241198 (SUPT5H)
Transcription machinery [BR:
hhv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120241198 (SUPT5H)
RNA polymerase I system
120241198 (SUPT5H)
Messenger RNA biogenesis [BR:
hhv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
120241198 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
120241198
NCBI-ProteinID:
XP_039102120
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSVAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtgaggacagtaacttctccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaagaagagcggcggagtgtagcaggcagtgagaaggaggaa
gagcccgaggaagaagaggaggaggaagaggaggaagaatatgatgaggaagaggaagag
gaagatgatgaccggcctcccaaaaaaccccgccatggcggcttcatcctggacgaggct
gatgtggacgacgagtatgaggatgaggaccagtgggaggacggagcagaggacatccta
gagaaagaagagattgaagcctccaatatcgataatgttgttctggatgaagaccgttct
ggggctcgccgcctccaaaacctctggagggaccagcgagaggaagaactgggcgagtac
tacatgaagaaatatgccaagtcgtctgtgggagagacggtgtacggaggatccgatgag
ctctctgatgacatcacccagcagcagctgctcccgggagtcaaggatccaaatctgtgg
actgtcaaatgtaagattggggaggagcgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtccgtggtggcacccgagcac
gtgaagggctacatctacgtggaggcctacaagcagacgcacgtgaagcaggccatcgag
ggcgtgggcaacctgcggctcggctactggaaccagcagatggtgcccatcaaggaaatg
acagatgtgctcaaagtcgtgaaggaggtggccaacctgaagccgaaatcctgggtccgc
ctcaagaggggcatctataaggacgacatcgcccaggtggattacgtggagcccagccaa
aacacaatctccttgaagatgatcccacgcatcgactatgaccgcatcaaggcccgcatg
agcctgaaagactggtttgctaaaaggaagaagtttaagcgacctccgcagaggctgttt
gatgccgagaagatcaggtccctgggcggcgacgttgcctctgatggtgacttcctcatc
ttcgaggggaaccgttacagccgcaagggctttctgttcaagagctttgccatgtctgct
gtgatcacagagggtgtaaagcctacactctctgagctggagaagtttgaggaccagcca
gagggcatcgaccttgaggtggtgactgagagcacagggaaggagcgggaacacaacttc
cagcctggggacaatgtggaggtgtgtgagggcgagctcatcaacctgcagggcaagatc
ctcagcgtggacggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ttggagttcccggcccaggaacttcggaagtactttaagatgggggaccacgtgaaggtg
attgctggccgatttgagggtgacacaggcctcattgtgcgagtggaggagaactttgtt
attctgttctctgacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacggcgtcgggtgtggatgtggggggccagcatgagtggggggagctggtg
cagctggacccccagaccgtgggtgtcatcgtgcggctggagcgggagaccttccaggtg
ctgaatatgtatgggaaggtggtgaccgtccggcaccaggctgtgacccggaagaaggac
aaccgctttgccgtggccctggactcagaacagaataacatccacgtgaaagacatcgtc
aaggtcattgacggcccccactcaggccgggagggcgaaatccgtcacctcttccgcagc
tttgccttcctgcactgcaagaagctggtggagaacgggggcatgtttgtctgcaagacc
cgccacctcgtcctggcagggggctcgaagccccgagatgtgaccaacttcacagtgggt
ggctttgcccctatgagcccccggatcagcagccccatgcaccccagcgctggaggtcag
cgtggtggctttggcagccccggtggcggcggcggcggcatgagcaggggccgagggcgg
agagacaacgaactcataggccagaccgtgcgcatctcccaagggccctacaaaggctac
atcggtgtggtgaaggatgccactgagtccacggcccgtgtcgagctgcactccacctgc
cagaccatctctgtggaccgtcagcggctcactacggtgggctcacggcgcccaggtggc
atgacctccacctatgggcggacgcccatgtacggctcccagacgcccatgtatggctct
ggctcccgcacacccatgtatggctcccagacccctctccaggatggcagccgtaccccg
cattacggttcacagacacccctgcatgacggcagtcgtacacctgctcagagtggggct
tgggaccccaacaaccctaacacgccgtcacgggctgaggaagagtacgagtatgccttc
gacgacgagcccacgccgtccccacaggcctatgggggcacccccaatccccagacacct
ggctatcccgacccctcatccccacaggtcaacccgcagtacaacccacagacgcccggg
acgccagccatgtacaacacagaccagttctccccctatgccgccccctccccgcaaggc
tcctaccagcccagccccagcccccagagctaccaccaggtggcgccgagcccggcgggc
taccagaacacccactctccggccagctaccaccccaccccctcacccatggcctatcag
gccagccccagcccgagccctgttggctacagtccgatgactcccggagccccctcccct
ggcggctacaacccgcacacaccaggctcaggcattgagcagaactctagtgactgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacacaggtggtggggcag
acaggagtcatccgcagcgtcacaggaggcatgtgctctgtgtacctgaaggacagtgag
aaggttgtcagcatctccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaggtgatcctgggcgaggatcgggaagccacgggtgtcctgttgagcatcgacggg
gaggatggcatcgtgcgcatggatcttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagcttctggaggcctag
DBGET
integrated database retrieval system
