Hyaena hyaena (striped hyena): 120241883 Help Entry 120241883         CDS       T07257                                  Symbol LIG1 Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism hhv  Hyaena hyaena (striped hyena) Pathway hhv03030   DNA replication hhv03410   Base excision repair hhv03420   Nucleotide excision repair hhv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hhv00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     120241883 (LIG1)    03410 Base excision repair     120241883 (LIG1)    03420 Nucleotide excision repair     120241883 (LIG1)    03430 Mismatch repair     120241883 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hhv03032]     120241883 (LIG1)    03400 DNA repair and recombination proteins [BR:hhv03400]     120241883 (LIG1) Enzymes [BR:hhv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      120241883 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      120241883 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      120241883 (LIG1) DNA replication proteins [BR:hhv03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     120241883 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      120241883 (LIG1) DNA repair and recombination proteins [BR:hhv03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      120241883 (LIG1)    NER (nucleotide excision repair)     Other NER factors      120241883 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      120241883 (LIG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C PucR DDR Motif Other DBs NCBI-GeneID:  120241883 NCBI-ProteinID:  XP_039103200 LinkDB All DBs Position Unknown AA seq 914 aa AA seqDB search MQRSIMSFFHPKKEGKAKKPEKETSNRETEPPPKAALKERNGEVPELDSPVKRPGRKAAR VLGSEGEEEDEAFTPSKGQKPAPGSPPMSPASPITFPEGSPPLSDASPVGISPAGIPKRR TARKQLPKRTIQDVLEEQSKDGDREAKRKKEEEAETPKESLTEPELAQRKEAEGEDRPAV PAEPLEASSAEPPAESTSEPEVAGKQDAQGQDQARPPPKAPKMVSSFFAPRKPATKKEGK EEGPGASRNEETKGPPDPPSYNPAKNNYHPIDDACWKEGQKVPYLAVARTFEKIEEVSAR LRMVETLSNLLRSVVALSPPDLLPILYLSLNSLGPPQQGLELGVGDGVLLKAVAQATGRQ LESVKAEAAEKGEVGLVAENSRSTQRLMLPPPALTAAGVFAKFRDLARLAGSASTAKKMD VIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLTPPGQGFPPAVVDAGK GRTAEARKTWLEEQGMVLKQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGVPLKPMLA HPTRGVSEILKRFEEAAFTCEYKYDGQRAQIHVLENGEVKIFSRNQEDNTGKYPDILSRI PKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDEADIQVQVCVYAFDLIYL NGESLVREPLSRRRQLLWDNFVQTEGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVK TLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDE ESEEFQAICKLGTGFSDEELEEHFQSLQALVLPSPRSYVRADGAVAPDHWLDPSAVWEVK CADLSLSPIYPAARGLVDGEKGISLRFPRFIRVRKDKKPEEATTSAQVASLYRKQSQIQN QQGADLDSDPEDFY NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atgcagcggagtatcatgtcatttttccaccccaagaaggagggcaaagcgaaaaagcca gagaaggagacctccaacagagagacagagccacctccaaaggcggcactgaaggaacgg aacggagaggtgcctgagctcgattctccagtgaagaggccagggcggaaggcggcccgg gtcctgggcagtgaaggggaggaggaggatgaagccttcacgccctccaaaggccagaag ccggccccgggctctccacccatgtcccctgccagcccaatcacgtttcctgagggcagc cctcccctctccgacgcctctcctgtggggatctccccagcagggatcccgaagcggcgc acagctcggaagcagcttcctaaacgcacgattcaggatgtcctggaagagcagagcaag gatggggacagagaggcaaagaggaagaaggaggaggaagcagagaccccaaaagaaagc ctcaccgagcctgagctggcccaaaggaaggaagcggaaggggaggacaggcctgcggtg cctgctgagcccctagaggcctcctcagctgagcccccggcggagagcacctcagagccc gaggtggccgggaagcaggatgcacaggggcaggaccaggccaggcctccccccaaagct cccaagatggtcagcagcttctttgctccccggaagccggcgaccaaaaaagaagggaaa gaagagggacctggtgcctcaagaaacgaggagaccaaaggacccccggacccccccagc tacaatcctgccaagaacaactaccatcccatcgacgacgcctgctggaaggagggccag aaggtcccttacctggctgtggcccggacatttgagaagattgaggaggtttctgctagg ctccggatggtggagacgctgagcaacttgctgcgctccgtggtggccctgtccccccca gacctgctccccatcctctacctcagcctcaacagcctcgggccaccccagcagggcctg gagcttggcgtcggtgacggtgtcctcctcaaggcggtggcccaggccacagggcggcag ctggagtcggtcaaggccgaggcggcagagaagggcgaagtggggctggtggccgagaac agccgcagcacccagaggctcatgctgcccccgcccgccctcacggccgccggggtcttt gccaagttccgagacctcgcccgactcgccggcagcgcttccacagccaagaagatggac gtcatcaaaggcctctttgtcgcctgccgtcactcagaagcccgattcattgccagagcc ctgagtggacggctgcgcctcgggctggcagagcagtcggtgctggccgccctcgcccag gccgtgagcctcacgccccccggccaaggcttccccccggctgtcgtggatgccgggaag ggccggacagcggaggcccggaagacgtggctggaggagcagggcatggtcctgaagcag acgttctgcgaggtgcccgacctggaccgcatcgtccccgtgctgctggagcacggcctg gagcgcctcccggagcactgcaggctgagcccaggggtccccctgaaaccgatgctggcg caccccacccgcggcgtcagcgagatcctgaaacgctttgaggaggcggctttcacctgc gagtacaaatacgacgggcagcgggcgcagatccacgtcctggaaaacggggaggtgaag atcttcagcaggaatcaggaagataatactgggaagtacccggacattctcagccgcatc cccaagatcaaactgccgtctgtcacgtccttcatcctggacacggaagccgtggcgtgg gaccgggaaaagaagcagatccagccgttccaggtgctcaccacccgcaaacgcaaggag gtggacgaggcagacatccaggtccaggtgtgtgtgtacgccttcgacctcatctacctc aacggagagtccctggtacgcgagcccctttcacggcgccggcagctgctctgggacaac ttcgtgcagacagagggcgagtttgtcttcgccacctcgctggacaccaaggacacagac cagatcgccgagttcttggagcagtccgtgaaggactcctgtgaggggctgatggtgaag accctggacgttgatgccacgtacgagatcgccaagaggtcacacaactggctgaagctg aagaaggactacctcgatggggtgggcgacaccctggacctcgtggtgatcggcgcctac ctgggccgcgggaagcgggctggccgctacgggggcttcctgctggccgcctacgacgag gagagtgaggagttccaggccatctgcaagcttggaaccggcttcagtgatgaggagctg gaggagcatttccagagccttcaggccctggtgctgcccagcccacgctcctacgtccgg gccgacggcgccgtggcccccgaccactggctggaccccagcgccgtgtgggaggtgaag tgcgccgacctgtccctgtcccccatctaccccgctgcccggggcctggtggatggtgag aaggggatctccctccgtttcccccggtttatccgcgtccgcaaagacaagaagccagag gaggctacaaccagtgcccaggtggcctccctgtacaggaagcagagtcagattcagaac cagcagggcgcggacttagactccgacccagaagatttctactag

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