Hyaena hyaena (striped hyena): 120241928
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Entry
120241928 CDS
T07257
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03440
Homologous recombination
hhv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120241928 (BRIP1)
03460 Fanconi anemia pathway
120241928 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhv03400
]
120241928 (BRIP1)
Enzymes [BR:
hhv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120241928 (BRIP1)
DNA repair and recombination proteins [BR:
hhv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
120241928 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
120241928 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
DUF1866
Motif
Other DBs
NCBI-GeneID:
120241928
NCBI-ProteinID:
XP_039103265
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MMSSMSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSVALLCSA
LAWQQSFNGKPVDKSLSKKAEVPSSCCCACHSKNFTNIDLKQGTSHHFNSPSTPPLERYG
TSSTCQEDSPEKSTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VHHLDATVASGKTKLNSPLGKINSASLQNPPGHCSRCCCSAKQGNSQDSSNTTKKDHGGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCME
LLDGKNGKSCYFYHGVHKIRDQHTLQTLEGMCKAWDIEDLISLGKKLKACPYYTARELIE
DAHIIFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLWFARD
ELDTMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERDYETSCKIWSGSEMLLNLHKM
GITTDTFPILQGHFSSVLQKEEKVLPIYGREEAREVPIISASTQIILKGLFMVFDYLFRQ
NSRFADDYKVAIQQTYSWIHQTNISDKSEFFAQAKNKKRIRQKTAVRVLNFWCLNPAVAF
SDINDKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRHL
CATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKFKERWLSTGLWHSLELV
KTVIVEPPAVEKIDFDELLQIYYDAIKYKGEKDGALLIAVCRGKVSEGLDFSDDNARAVV
TIGIPFPNVKDLQVVLKRQYNDQHSKLRGLLPGRQWYEIQAFRALNQALGRCIRHKNDWG
ALILVDDRFSSDPTRYISGLSKWIRQQIQYHSTFESAMESLAEFSKKHQKVIDVSKEDRK
FIQDSESTLEVSCLKDNPLTYLLEAANHLPTENPWEGEAKMCAQELHCPKITTSPSLPID
IVSQKEQDDPVLLEESAQTMKAETIVISRSTSPTFNKQTKRVDWSSFNSLGHYIIDEILT
AAPKFRSSEDYASRASPVETEKGCKTVLPLTDKCESSSLTVNTSVGSCPQSEIVISSVKT
DDNYSEQLSYEEALDPDIELSVVSEEAKLSISNRASDIEAEDESIYFTPELYDPEDTNEE
KNEQVESDRDNRWANNSDCVLAEDLFEIRTEKGVDSVQEMKAEDCTKLNRLMHIKEGKVN
DXYSNVRTTHINKLDLGKTRETDIKNIKQSPSKNKGVFPGVR
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcgatgtctgaatatacaattggtggggtgaaaattacctttccttataaa
gcttacccatcgcagcttgctatgatgaattctattgtcagaggattaaatagtaagcaa
cattgtttactggagagccctacaggaagtgggaaaagtgtagccttactttgttctgct
ttagcatggcaacaatcttttaatgggaagccggtggacaaaagcttaagtaaaaaagct
gaagtaccatcgtcatgctgttgtgcatgccattcaaagaattttacaaacattgacttg
aaacaaggaacttcacatcatttcaacagtccaagtacaccacctttagaaagatatggc
acttcatcaacttgtcaagaagactctcctgaaaaaagtacgctggctgcaaagctatct
gccaagaaacaggcttccataaaaagagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaactacacagcagattagaaagcgtcattgttttgaaaaagaa
gtacatcatttggatgcaacagttgcttcaggaaagacaaaactcaactctccattagga
aagataaactctgcttctctacaaaatccccctggtcactgttccaggtgttgttgttct
gctaaacaaggaaacagtcaagattcctcaaataccacaaagaaggatcatggggggaaa
tccaagatacccaaaatatattttgggacacgcacacacaaacagattgctcagattact
agagagctccggagaacagcatattcaggggtcccaatgactattctttccagcagggat
catacttgtgtccatcctgaagtagtgggtaacttcaacagaaatgaaaagtgcatggaa
ttgttggatggaaaaaatggcaaatcctgctatttttatcatggtgtgcataaaattcgt
gatcaacacacattacagactctggaagggatgtgcaaagcctgggatatagaagacctc
atcagcttgggaaaaaaactaaaggcatgtccatattacacagcacgagaactaatagaa
gatgctcacataatattttgtccctacaactatcttctggatgcacaaataagggaaagt
atggatatcaatctgaaagagcagattgtcattttagatgaagcacataacattgaggac
tgtgctcgggagtcagcaagttacagtgtaacggaagttcagctttggtttgctcgagat
gaactagatactatggtcaacaataatataaggaagaaagaccatgaaccactaagagct
gtgtgctatagcctaattaattggttagaagcaaactctgaacatcttgtggaaagggat
tatgaaacatcctgtaaaatctggagtggaagtgaaatgctcttaaatttacacaaaatg
ggcatcaccactgatacttttcccattttgcagggacatttttcttctgttcttcaaaaa
gaagaaaaggtcttaccaatttatggtagagaagaggcaagagaagtaccaattattagt
gcttcaactcaaataatactcaaaggactttttatggtgtttgactatcttttcaggcaa
aacagcagatttgcagatgattataaagttgctattcaacagacttattcttggatacat
cagactaatatttcagataaaagtgaattctttgctcaagccaaaaacaagaaacgtata
agacagaaaactgcagttcgtgtgctaaacttttggtgcttaaatccagctgtggccttt
tcagatattaatgacaaagtttggaccattgttttgacatctgggacattatcaccaatg
aaatccttttcatcagaacttggtgttacgtttactatccaactggaggctaatcatgtc
attaataactcacaggtttgggttggcaccattgggtcaggccccaagggtcggcatctc
tgtgcaaccttccagcacacggaaacatttgagtttcaggatgaagtaggggcacttttg
ttatctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttacaagtta
ttagaaaagttcaaagaacgttggctctccactggtttatggcatagtctagagttggtg
aagacagtcattgtagaaccaccagcagtagaaaaaattgattttgatgaattactacag
atatactatgatgcaatcaagtacaaaggagagaaagatggagccctcttgatagcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtggta
acaatcgggattccttttccgaatgtgaaagatctacaggttgtactaaagcgacagtac
aatgatcagcactccaaactgagaggtcttttacctggtcgtcagtggtatgaaattcaa
gcatttagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgggga
gctcttattctagtggatgatcgctttagtagtgaccccactcgatatatatctgggctt
tctaaatggatacggcagcagattcagtaccattcaacctttgaaagtgcaatggagtcc
ttggctgaattttccaaaaagcatcagaaagtcattgatgtatccaaagaagacagaaag
tttatacaggacagtgagtctacacttgaagtgtcctgtttgaaggacaatcccttaact
tacttattagaagcagcaaatcatctaccaacagaaaatccttgggaaggtgaagcaaaa
atgtgtgcccaggaactacattgtcctaaaataactacaagtccatctctaccaatagac
atcgtctcccaaaaggaacaagatgatcctgtattattggaagagtctgcccagacaatg
aaagcagaaacaattgtgatttccagatcgacaagcccaaccttcaacaaacagacaaag
agagttgactggtctagctttaattctttgggacattatattattgatgaaattctgact
gcagcacctaaattcaggtcatcagaggactatgcctctagagcttcccctgttgaaaca
gaaaagggatgtaaaacagttttaccactcactgataaatgtgagtcctcatccctaaca
gtaaacacatcagttggatcatgccctcaatcagaaattgttatttcatcagtaaagact
gatgacaattattctgaacagctgtcctatgaagaagccctggatccggacattgaattg
tctgtagttagtgaagaagctaaactttccatttcaaatagagcttctgacatagaagca
gaggatgaatctatctattttacacctgagctttatgatcctgaagacacaaatgaagaa
aagaatgaacaagttgaaagtgatagagataatagatgggctaataattcagattgcgtt
ttagctgaagatctttttgaaattagaactgagaaaggagtggattcagtccaagaaatg
aaagctgaggattgcacaaagttgaatagactcatgcatattaaagaaggcaaagttaat
gacnaatacagtaatgtaagaacaacccatataaataaattagacctgggaaaaactcgt
gaaacagatataaagaacattaaacagtctccttccaaaaataaaggtgtgttccctggt
gttaggtaa
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integrated database retrieval system
