Hyaena hyaena (striped hyena): 120243156
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Entry
120243156 CDS
T07257
Symbol
CCDC88A
Name
(RefSeq) girdin
KO
K25392
girdin
Organism
hhv
Hyaena hyaena (striped hyena)
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhv03037
]
120243156 (CCDC88A)
Cilium and associated proteins [BR:
hhv03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120243156 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
120243156
NCBI-ProteinID:
XP_039105130
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEEMEPLLKNMALHLKRLIDERDEHSETIVELSEERDGLHFLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVSELTSSKLLKLEMENQSLTKTVEELR
STMDSAEGNTSKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKVLHESIKETS
SKLSKIEFEKRQIRKELEHFKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEISIYKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVCEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSS
PPTSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE
AVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLITKHGTLKSAHKNLEVEHKDLED
RYNQLLKRKGQLEDLEKTLKVEQEKMLLENKNHETIAAEYKKLCGENDRLNHTYNQLVKE
TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ
DSSSVGSNSLEDGQTMGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV
LAGGQWTGSSENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDT
TSFEDISPQGISDDSSTGSRVHASRPASLDSSRTSTSNSNNNASLHEVKAGPVNIQSRPQ
SHSSGEFSLLHDHEAWSSSGSSPIQYLKRQTRSSPMLQHKMPETLESRVHHKIKTGSPGS
EVVTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKNKPVSCGLARSVSGK
TPGDFYDRRTNKPEQYMRPSPRKTEDAYFISSPGKPTLGTQGKIKLVKETSLSRQSKDSN
PYATLPRASSVISTAEGTTRRTSIHDFLTKDSRLPISVDSPPATADSNITTAPHVDKVQE
SRNSKSRSREQQSS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagatttttactcccctcctggagcagtttatgaccagccccttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctggatgaatatgtg
gctttggttgatggggtattcttgaaccaggtcatgctccaaatcaatcctaaatcggag
agtcagagagtaaataaaaaagtcaacaatgatgcatcacttagaattcataatctatcc
attttggtgagacagataaaattttattaccaggagactttgcagcagttgattatgatg
tcattgccaaatgtcttaatcattggcaaaaaccctttttctgaacaaggcacagaagaa
gttaaaaagttgcttttacttttactgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaacccataatcaggaaaatgtgtttgatctgcagtggatggaagtgactgat
atgtctcaggaggaaatggagccactgttgaaaaatatggcattacatctaaaaagactt
atagatgaaagagatgaacattcggagactattgtagaactctctgaagaacgggatggt
cttcattttttaccccatgcctcttcatctgcacagtcaccctgtggttctccaggcatg
aagcgaacagaaagtcgacaacatctgtcagtggaactggcagatgctaaggcaaagata
agaaggcttaggcaggaattggaggagaagactgaacagttgttggactgtaaacaagaa
cttgagcaaatggaaatagaactaaaaaggctgcaacaagagaatatgaatttgctttcg
gatgctcgttctgctagaatgtaccgagatgaattagatgcacttcgagagaaagcaatc
agagtggataagcttgaaagtgaagtcagcagatataaagaaagactacatgatattgaa
ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattagaaacaaaa
accatgttggaagatcaattagaaggaactagagctcgttctgataaattacatgaatta
gaaaaagaaaatttacaactaaaagctaaactgcatgatatggaaatggaacgtgatatg
gatagaaaaaagattgaagaattaatggaagaaaatatgacattggaaatggcacagaaa
caaagtatggatgaatcattacatcttggctgggagctggaacaaatatctagaactagc
gaactttctgaagcaccacaaaaatccttgggccatgaagtgagtgagttaacatcaagt
aagttattgaagttggaaatggaaaaccagagtctgacaaaaactgtagaagaacttcgg
agtactatggattctgcagaaggcaacacttccaaaatcctgaaaattgaaaaagaaaat
caaagactaagtaaaaaggttgaaattcttgagaatgagattattcaagaaaaacaaagt
cttcagaattgtcagaatttaagcaaggatctaatgaaggagaaggctcagcttgaaaaa
acaattgaaacacttagagaaaattcggaaagacagattaaaatactggaacaggaaaat
gaacatctgaatcaaactgtgtcttctttgagacagcggtcccagataagtgctgaagca
agggtgaaagacattgaaaaagaaaataaagttctccatgaatctatcaaagaaacaagt
agcaagttaagcaagattgaatttgaaaaaagacaaattagaaaagaattggaacatttt
aaagagaaaggagaacgggcagaagaacttgaaaatgagttgcatcatctagagaaagaa
aatgaattgttacagaaaaagataaccaatttaaaaattacttgtgaaaaaattgaggcc
ttagaacaagaaaattcagagctagaaagagaaaatagaaaattgaaaaagacattagat
agctttaaaaacctaacttttcagttagaatccctagaaaaagagaattcccaactagat
gaggaaaacttagaactacgaaggaatgtggaatctttgaagtgtgcaagcatgaaaatg
gctcagctacaactagaaaataaagaactggaaagtgaaaaagagcagcttaagaagggt
ttagaactcatgaaagcatctttcaagaaaacagaacgcttagaagttagctaccagggt
ttagatacagaaaatcaaagactacagaaagctctagaaaatagcaataaaaaaattcag
cagttagagagtgagctacaagacttagagatggaaaatcaaacattgcagaaaaaccta
gaagagttaaaaatatcaagcaaaagactagaacagctagaaaaagaaaataaatcatta
gagcaagagacttctcaactggaaaaggataagaagcaactggagaaggaaaataaaaga
ctccgacaacaagcagaaataaaagataccacattagaagaaaataatgtgaaaattgga
aatttggaaaaagaaaacaaaactcttttcaaagagatcagtatttataaagaatcctgc
attcgtctgaaagaattagagaaagaaaataaggagcttgtgaaaagagcaactattgat
ataaaaactttagttacattacgagaggatttggtgtgtgaaaaattgaagactcagcaa
atgaataatgatctcgaaaaattaactcatgagcttgaaaagatagggttaaataaagag
cgactcttgcatgatgagcagagtactgatgacagcaggtacaagcttttggaatcaaaa
ttagaatctactctaaagaagtctcttgaaattaaagaagaaaaaattgctgctttagaa
gctcgattagaagaatccacaaattataaccagcagttgcgccaagaacttaaaacagtg
aaaaagaactatgaagctctcaaacagagacaagatgaagaaaggatggttcagagctct
cctccaacttctggtgaagacaataaatgggagcgagaaagtcaagaaacgactagagag
cttctgaaagttaaagacagattaattgaagtagaaagaaataatgctacattgcaagca
gagaagcaagcactgaaaactcaactgaagcaacttgagacacagaacaataatttgcag
gctcagattcttgcacttcagaggcagacggtatcattacaggaacagaatactactctt
caaacacagaatgcgaagcttcaggttgaaaattctacccttaattcccaaagtacgtca
cttatgaatcagaatgcacaactcctaatccagcagtcttctttagaaaatgaaaatgaa
gctgtaatcaaagagcgagaagatctgaaatctctctatgattctctgatcaaagatcat
gaaaagctggaacttcttcatgaacggcaggcttcagagtatgagtctctcatcactaaa
catggaactctaaagtctgcccacaaaaatcttgaagtagaacataaagaccttgaagat
cgttacaatcagttactaaaacggaaaggacagttggaagatttggaaaaaacactgaaa
gtagaacaggaaaaaatgctccttgaaaataaaaaccatgagactatagctgcagaatat
aagaaactttgtggtgaaaatgataggttgaaccatacatataatcagcttgtaaaagaa
actgaagttttacagactgaccataaaaacttgaaaagtcttctaaataattccaaactg
gaacaaacaagattagaagctgaattttcaaagctaaaggaacagtaccaacagttggac
atcacatccaccaagctaaataaccagtgtgagttgctaagtcaacttaagggaaattta
gaagaagaaaatcgacatctgctagatcaaattcagacattaatgctacaaaacagaaca
ctattggaacaaaatatggaaagcaaggatctctttcatgttgaacaaagacaatacatt
gataagttaaatgaattaagacgacaaaaggagaaattagaagagaaaataatggatcaa
tacaaattttatgacccatctccccctagaaggaggggcaactggattactctaaaaatg
agaaaattgataaagtctaagaaagatattaatcgagaacgtcagaaatctctaacatta
acacctacccgttcagactccagtgaaggatttcttcaactcccccatcaagatagccaa
gatagttcttcagtaggctcaaactctttagaagatggccaaactatggggaccaagaaa
agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac
aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc
ctagcaggaggacagtggacaggtagttctgagaatttggaggttcctgatgatatttca
acgggtaaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttt
tcaactgtcaactcttctacaggcttcagatccaagcagttggttaataataaagatact
acatcctttgaagacataagtccacaaggtattagtgatgattctagtacgggatcaaga
gttcatgcttcaagaccagccagccttgatagtagcagaacatccactagcaatagtaat
aataatgcctcactccatgaagtcaaagcaggtccagttaatatccaaagcaggccacaa
agccacagcagtggagaatttagcctgcttcatgatcatgaagcttggtccagcagtggt
agcagcccaatccagtacttgaaaagacagaccagatcaagtccaatgctccagcacaaa
atgcctgaaacattagagagtcgagtacatcacaagatcaaaactggttctcctggaagt
gaagttgttactctacaacagtttttggaagaaagcaacaagcttacctcaatacagata
aagtcctcaagtcaagagaatcttttagatgaagtaatgaaaagtttgtctgtctcttct
gactttttgggaaaaaacaaaccagttagctgtggtctggccaggtcagtaagtggaaaa
accccaggagacttctacgatagacggacaaataagcctgaacaatatatgagacccagt
cctcgaaagactgaagatgcctacttcattagctctccaggaaaacctaccttaggcact
caaggaaagataaaattagtgaaagaaacttctctgtcacgacaatcaaaagatagtaat
ccttatgccactttacctcgtgcaagcagtgtgatctctactgctgaaggaactactcga
aggacaagcatccatgattttctgaccaaggacagtagactacctatatccgttgattca
ccaccagctactgctgatagcaacatcactacagcacctcatgtggacaaagtacaagaa
agcagaaattcaaaaagcaggtctagggagcaacaaagctcctaa
DBGET
integrated database retrieval system