Hyaena hyaena (striped hyena): 120244485
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Entry
120244485 CDS
T07257
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03082
ATP-dependent chromatin remodeling
hhv04714
Thermogenesis
hhv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120244485 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
120244485 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
120244485 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhv03021
]
120244485 (SMARCA4)
03036 Chromosome and associated proteins [BR:
hhv03036
]
120244485 (SMARCA4)
Transcription machinery [BR:
hhv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120244485 (SMARCA4)
Chromosome and associated proteins [BR:
hhv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120244485 (SMARCA4)
Chromatin remodeling factors
BAF complex
120244485 (SMARCA4)
PBAF complex
120244485 (SMARCA4)
GBAF(ncBAF) complex
120244485 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
120244485
NCBI-ProteinID:
XP_039106981
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGAHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQVAVQGKRPMPGLQQQMPALPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDGDAGSSTPTTSTRSRDKDDDS
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggcccttccccgggccca
ggcccctcccccggagccatgttgggccctagcccaggtccctcaccaggctctgcccac
agcatgatggggcctagtccggggcctccctcggcaggacaccccatcccgacccagggg
cctggagggtaccctcaggacaacatgcatcagatgcacaagccaatggagtccatgcac
gagaagggcatgtcggacgacccccgctacaaccagatgaagggaatggggatgcggtcg
ggggcccatgcagggatgggccccccaccaagccccatggaccagcactcccaaggttac
ccctcacccctgggcggctccgagcatgcctccagtccggttccagccagcggcccatcc
tcaggcccacagatgtcctctgggccgggaggggccccgctggacggtgccgacccccaa
gccttgggacagcagaaccggggcccgactccgtttaaccagaaccagctgcatcagctc
agagctcagatcatggcctacaagatgctggcccggggccagcccctccccgaccacctg
caggtggcggtgcagggaaagcggccgatgccggggctgcagcagcagatgccagcacta
cctccgccttctgtgtccgccacaggccctgggcccggccccggccccggccctggccct
gggcccggcccagcacctccaaattacagccggcctcacggtatgggagggcccaacatg
ccccccccaggaccctcaggtgtgccccctgggatgccaggtcagcctcccggagggcct
cccaagccttggcctgaaggacccatggcgaatgctgctgcccccacgagcacccctcag
aagctgatccccccgcagccaacgggccgcccctcaccagcgccccccgccgtcccgcct
gccgcctcccctgtgatgccgccccagacgcagtcgccggggcagcctgcccagcctgcc
cccatggtgcccttgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctggaccctgtggagatcctgcaggagcgggagtacaggctgcaggctcgaatcgcacac
cgaattcaggaacttgaaaatcttcccgggtccctggccggggatttgcgaaccaaagca
accattgagctcaaggccctcaggctgctgaacttccagaggcagctccgacaggaggtg
gtggtgtgcatgaggagggacacggccctcgagacggccctcaatgccaaggcctacaag
cgcagcaagcgccagtccctgcgcgaggcccgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccgccagaagcaccaggaatacctcaacagcatcctg
cagcacgccaaggatttcaaagaatatcatagatcggtcacaggcaaaatccagaagctc
accaaggcggtggccacgtaccacgccaacacggagagggaacagaagaaggaaaacgag
aggattgagaaagagagaatgcggaggctcatggccgaagatgaggaggggtaccgcaag
ctcatcgaccagaagaaggacaagcgcttggcctacctcctgcagcagacggacgagtac
gtggccaacctcaccgagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaacgcagaaggacagacgcctgccatcgga
cccgatggcgagcctctggatgaaaccagccaaatgagtgacctcccggtgaaggtcatc
catgttgagagtgggaagatcctcacgggcacagatgcccccaaggcggggcagctggag
gcctggctcgagatgaacccgggatacgaagtagctccaagatctgatagtgaagaaagt
ggctcagaagaagaagaggaggaggaggaagaagagcagccgcagccagcacagcctcct
accctgcccgttgaggagaagaagaagattccagatccagacagtgacgatgtctcggag
gtggatgcccggcacatcattgagaacgccaagcaagacgtcgatgacgagtacggcgtg
tcccaggccctcgcgcggggcctgcagtcctattacgccgtggcccatgcggtcaccgag
agggtggataagcagtcggcgcttatggtcaacggtgtccttaaacagtaccagatcaaa
ggtctggagtggctggtgtccctgtacaacaacaatctgaacggcatcctggctgacgag
atgggtctggggaagaccatccagaccatcgcgctcatcacgtacctcatggagcacaag
cgcatcaacgggccctttctcatcatagtgcctctctccacattgtcaaactgggcatac
gaatttgacaagtgggccccctccgtggtgaaggtgtcctacaagggctctccggcagcc
aggcgtgctttcgtcccgcagctccgaagtggcaagttcaacgttttgctgacgacttac
gagtacatcattaaggacaagcacatccttgcaaagatccgttggaagtacatgattgtc
gacgaaggccaccgcatgaagaaccaccactgcaagctgacgcaggtcctcaacacgcac
tacgtggccccgcgccgcctgctgctgacgggcacgccgctgcagaacaagctgcccgag
ctctgggcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcactttcgag
cagtggttcaacgcgccctttgccatgactggggaaaaggtggacctgaatgaggaggag
accattctcatcatccgccgcctccacaaagtgctgcggcccttcctgctccggcggctc
aagaaggaagttgaggcccagctgcctgagaaggtggaatacgtcatcaagtgtgacatg
tctgcgctccagcgtgtgctgtaccggcacatgcaggccaagggggtgctgctcaccgat
ggctccgagaaggacaagaagggcaaaggtggcaccaagaccctgatgaacaccatcatg
cagctgcgcaagatctgcaaccacccctacatgttccagcacatcgaggagtccttctcc
gagcacttggggtttaccggtggcatcgtgcaagggctggacctgtaccgcgcctcgggg
aagttcgagcttcttgataggattcttcccaaactccgtgccaccaaccacaaagtgctg
ctcttctgtcagatgacctccctcatgacgatcatggaagattattttgcgtatcgcggc
tttaaatacctcaggctcgacggaacgacgaaagcggaggaccggggcatgctgctgaaa
accttcaacgagccgggctccgagtacttcatcttcctgctcagcacccgggccgggggg
ctcgggctgaacctccagtcggccgacactgtgatcatttttgacagtgactggaaccct
caccaggacctgcaagcccaggaccgcgcccaccgcattgggcagcagaacgaggtgcga
gtgctccgtctctgcacggtcaacagcgtggaggagaagattctggccgcggccaaatac
aagctcaatgtcgaccagaaggtgatccaggccggcatgtttgaccagaagtcctccagc
cacgagaggcgcgccttcctgcaggccatcctcgagcacgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacctggaggagccacctctaaaggaagaagacgaggtgcccgacgacgag
acggtgaaccagatgattgcccggcacgaggaggagtttgacctgttcatgcgtatggac
ctggaccgcaggcgcgaggaggctcgaaaccccaagcggaagccgcgcctgatggaggag
gacgagctcccctcgtggatcatcaaggacgatgccgaggtggagcggctgacctgcgag
gaggaagaggagaaaatgttcggccgaggctcccgccaccgcaaggaggtggactacagc
gactcgctgaccgagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaaatcctctcggaagcgaaagcgggacggc
gacgccggctcctccaccccgaccaccagcacccgcagccgcgacaaggacgacgacagc
aagaagcagaagaagcgcgggcggccgcccgccgagaagctctcccccaaccctcccaac
ctcaccaagaagatgaagaagattgtggatgccgtgatcaagtacaaggacagcagcagt
ggacgtcagctcagcgaggtgttcatccagctgccgtcccgcaaggagctgcccgagtac
tacgagctcatccgcaagcccgtggacttcaagaagataaaggagcgcatccgcaaccac
aagtaccgcagcctcaatgacctggagaaggacgtcatgctgctgtgccagaatgctcag
accttcaacctggagggctccctgatctacgaagactccatcgtcctgcaatcggtgttc
accagcgtgcggcagaaaattgagaaagaggatgacagtgagggcgaggagagtgaggag
gaggaggagggcgaggaggaaggctctgagtctgagtcccgctcggtcaaagtgaagatc
aagctcggccggaaggagaaggcacaggacaggctgaaggggggccggcggcgaccgagc
cgcggatcccgggccaagccggtggtgagcgacgacgacagtgaggaggaacaggaggag
gaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
