Hyaena hyaena (striped hyena): 120244774
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Entry
120244774 CDS
T07257
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
hhv
Hyaena hyaena (striped hyena)
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhv03019
]
120244774
Enzymes [BR:
hhv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120244774
Messenger RNA biogenesis [BR:
hhv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120244774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Abhydrolase_11
Motif
Other DBs
NCBI-GeneID:
120244774
NCBI-ProteinID:
XP_039107442
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MGLEEHMMLLEKMSQLIMGALPKAEYSSLFNDFVESEFFLIDGDSLLATCICEKSLKQGQ
DLHFFYVVEYYLMDLISKGGQFAIVFFKDAEYAYFSLPKLLPLRTALILHLQRNTTIDVQ
TEFSGCLSQGWKSFLEERYPYYMIVADEGLNPLQTHLFNFLIIQSWAMKVNVVLSSGQTS
NILRLYAYLMPSTSKNQPFFSENKMKIENAYKVLIKQLQECRPLALESLFGNLKWKNIME
EACETIFLLKQLWPEGSDIRRVLCVTSCSLSLRMYHHFLENRKKSVSDENINIQEVESNC
LNVQEMEDLCKLHCLSVVFLLHLPLSQRTCARFITSHWTKNLQTFLKMKKWCEYFILSNI
NIFEFWNLNLIHLSDLSDELLLKNIAFYYENEDVEGLHLNLGDAIMKDYEHLWNTVSKLV
GKFSVGKPFPLRTTKLSFLEKNPSPIKDTSKEKIPNLGFIPMSCELLDKFVGDILKNLPL
LKSDDPTVTSLVKQKEFDELVHWHSHRPLSDDYDRTKCQYDEKCRDPRVLRSRQKYHVFQ
RFYGSSLESVSPKTVVTQAVKPKRNFSVPKNKKAHENKAEIITRENKKRLIAKEEEKEEK
RWKACSFSIEEEIKENFNSGMKNLEDFLKSCKSSSVKLRVEMVALTACLKAWKDHCRDKG
ETTKDLSIAVQMMKRIYSLMEQYPELLQEADHQFIAKCLKYLGFDELAGSLYPAQVVRDD
IKEMKRNKYSIGMGPVRFQLQYMGHYLIREERKDPDPRVQDFIPDTWQRELLDVVDNNES
AVIVAPTSSGKTYASYYCMEKVLKESNEGVVVYVAPTKALVNQVAATVHNRFTKNLPNGE
AICGVFTRDYRHDALNCQVLITVPACFEILLLSPHRQAWVKRIRYVIFDEVHCLGGEIGA
EIWEHLLVMIRCPFLALSATISNPEHLTEWLQSVKHYWKQEDNTMGKNRNAGYCASFHKD
HFPIKESYKVRLVLYGERYNDLEKHVCTIKDDDIYFDHFHPCAALTTDHIEKYGFPSDLT
LSPRETIQLYDTMFQFWESWPRAQELDPEKSIHFKNKIVIKKLDARKYEESLKAEFTSWI
KNGHAEEAKMVLRKLSPDSVFSSGNMVRMFPRLVEKLRKMGKLPALFFLFRLGDVEGRAL
SVRTFLELKQEEKRPPKADKEFHDLTNKLRKVTKSIEKQKAIEEKSQKNPRKMDQRLINE
AEHNNLLRTLEKNMEIPQDCTYANQKAIDEETLQMVFDRVKFTRKGADLKDLARRGIGYH
HSSLSFKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSVYLDALNYRQMSG
RAGRRGQDLLGDVYFYDIPLPKIEKLIKSKVPELRGQFPLSITLVVRLLLLASKGDDPED
AKAKVLSVLKHSLLSFKQPRVTEMLKLYFLFSLQFLMKQGYLDQEGKPLGFAGLVSHLHY
HEPSNLVFVSFLVKGLFHNLCQPTMKGSKHFSQDVMEKLVLVLANLFGRRLLPAKFQDTT
LKFYQSKVFLEDLPEDFNAALHEYNMNVTKDFASFLLNVSKLADMKQEYQLPLSKINFAG
KECEDSQLVSHLMNCKEGRVAISPFVYLSGNSDGDLLQPNTPNHVVLRTIGIHHTQAPVL
WSQVFDNQGRRMPLNAYALDFYKHGSLTGLVQDNRMNEGAAYQLLKDFALTIQSISVSLR
ELCENEDDNVVLAFEQLSETFFEKFNKV
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagaagaacacatgatgcttttagaaaaaatgtcacagttaattatgggtgca
ttgcccaaagctgaatattccagcttattcaatgattttgttgaatctgaattttttctg
attgacggagattcactacttgctacatgcatatgtgagaaatccttaaagcaggggcaa
gacctccacttcttttatgtagttgaatactatcttatggatcttatcagtaaaggagga
caatttgccatagttttcttcaaggatgctgagtatgcatatttcagcctccctaaactt
cttcctttgagaactgctttaattcttcatcttcagcgtaataccaccattgatgttcaa
acagaattttctggatgcttatcacaaggatggaaaagtttcttagaagaacgttatcca
tattacatgatagttgcagatgaaggcctgaaccctctacaaacacaccttttcaacttt
ttaattattcagtcttgggcaatgaaagtcaatgttgtgctttcctcagggcaaacgtcc
aatattcttcgactttatgcataccttatgccaagcacatccaagaatcaaccttttttc
agtgagaataaaatgaagattgagaatgcttataaagtcctgattaaacaattgcaagaa
tgtagacctttagcactagaatctctttttggaaatttaaaatggaaaaatataatggaa
gaggcatgtgaaactatttttctgcttaagcaactctggccagaaggatctgacattcgg
cgtgttctttgtgttacttcatgctcattgtctttgagaatgtaccatcactttttagaa
aacagaaagaagagtgtctctgatgagaacattaacatccaagaggtggaaagtaattgc
ttaaatgtgcaagagatggaagatctgtgtaaactgcactgtctcagtgtggtttttcta
ctccacttgcctctttcccaaaggacctgtgctagattcatcacttctcattggactaag
aacctccagactttcttaaagatgaaaaagtggtgtgaatatttcatcctaagtaatata
aacatttttgaattttggaatctgaatttaattcacctgtctgacttaagtgatgagctt
ttgttgaagaatattgctttttactatgaaaatgaagatgttgaaggtctacatttgaat
ttgggggatgccattatgaaggattatgaacatctctggaatactgtgtcaaagttggtc
ggaaagttttctgttggaaagccatttcctctgagaacaacaaaactttcttttcttgaa
aagaatccctcgccaatcaaagatacctccaaggaaaagattcctaatttgggttttatt
cctatgtcttgtgaattgcttgataagtttgttggtgacattttgaaaaatttgccttta
ttaaagagcgatgatcctactgtaacttcactggttaaacaaaaagaatttgatgaactt
gtgcattggcattctcatagaccgcttagtgatgattatgacaggacaaagtgtcaatat
gatgaaaaatgtagagatcctcgtgttcttaggtctcggcagaagtatcatgtttttcaa
cgattttatgggagttcattagaatcagtctctccaaaaactgttgtaactcaagctgtc
aagcctaagaggaatttcagtgtacccaagaacaaaaaggcacacgagaacaaggctgaa
ataattactagagagaataagaagaggttaattgctaaggaggaagaaaaagaggagaaa
agatggaaggcttgttcattttctattgaggaggaaattaaagagaacttcaactctgga
atgaagaacctggaagattttttgaaatcatgtaaaagtagctctgtgaaattacgagtt
gaaatggtcgcgttaactgcctgcttgaaagcgtggaaagatcattgtcgtgataaaggt
gaaaccacaaaagacttaagtatagctgttcagatgatgaaaaggatctactccttgatg
gaacaatacccagagcttttgcaggaggcagatcatcaattcatagccaaatgcctgaag
tacttaggatttgatgaattggcaggttctttatatccagcccaggttgtaagagacgac
ataaaggagatgaaaaggaataaatattcaattggcatggggccagttcggtttcaacta
caatacatgggccattatttgatacgagaggagagaaaagatccagatcccagagttcag
gattttattcctgacacatggcagcgtgagctcctcgatgttgtggataataatgagtca
gcagtgattgttgccccaacgtcctcaggcaaaacctatgcttcctattactgcatggag
aaagtgctgaaggagagcaatgaaggggtggttgtgtatgttgcaccaacaaaggccctt
gttaatcaagtggcagcaactgttcataaccgttttaccaaaaatctgccaaatggtgaa
gctatatgtggtgttttcacaagggattatcgtcatgatgccctaaactgtcaggtactt
attacagtgcctgcctgctttgaaattctactattatctcctcatcgccaagcatgggtg
aaaaggatcagatatgttatatttgatgaggtccactgtcttggtggagaaattggagca
gaaatctgggagcatctccttgtcatgatccgatgtccctttttggctctttcagctacc
ataagtaaccctgaacatcttactgagtggctacaatcagtgaaacactactggaaacaa
gaagacaatacaatgggaaaaaatagaaatgctggctattgtgccagttttcataaagat
cactttccaataaaggaatcatataaagttagacttgtgctctatggagagagatacaat
gatttagagaagcatgtatgtacaataaaagatgacgacatttattttgatcattttcac
ccatgtgctgcactaacaacagatcatattgaaaagtatggattcccttctgaccttacc
ctctcccctcgagaaaccatccagctttatgataccatgtttcagttctgggaaagctgg
cccagggcccaggagttggatccagagaaatccattcattttaagaataaaatagtcatt
aaaaagttggacgctagaaaatatgaagagagcttaaaggcagaattcaccagttggatt
aaaaatggccatgctgaggaggccaaaatggttctgaggaaacttagtcctgattcagtt
tttagttcaggaaacatggtaagaatgtttccacggctcgttgaaaagctaaggaaaatg
ggaaagttaccggcattattttttttattccgcttaggagatgtagaagggagggctcta
agtgtgagaactttcctggagctaaagcaagaggaaaaaaggcctcccaaagctgataaa
gaattccatgacttgactaacaaacttcgaaaagttacaaaatccatcgagaaacaaaag
gcaatagaagagaaaagccagaaaaatcccagaaaaatggatcaaaggctaataaatgaa
gctgaacataataatctactcagaactttagagaagaacatggaaatccctcaggactgt
acctatgctaatcaaaaagcgatagacgaagagactttgcagatggtgttcgatcgagta
aaattcacaagaaaaggtgcagacctgaaggatttggcaagaaggggtattggatatcat
cacagctctttaagcttcaaagaaaaacagttagtagagattctttttaggaaaggattt
attagggtggtaacagctactggaacacttgctttaggaatcaacatgccttgtaaatct
gtggtttttgctcaaaactcagtctatctggatgctttaaattacagacagatgtctgga
cgtgccggaagacgaggtcaagacctgttgggagatgtatatttctatgatattccattg
cccaaaatagaaaaactcattaaatccaaagttcctgaactgagaggacagtttcctctc
agcataactctggtcgtgcgactcctgcttctggcttccaagggagatgacccagaggat
gctaaggcaaaggtgctgtctgtgctaaagcattcgttgctgtccttcaaacaacccaga
gtcacggagatgttaaaactttacttcttgttttctttacagtttcttatgaaacagggc
tatttagatcaagaaggtaaaccgttggggtttgctggacttgtatcacatttgcattat
catgagccttctaatcttgtgtttgtcagttttcttgtaaaaggccttttccataatctc
tgtcagccaactatgaaaggctcaaaacatttttctcaagatgttatggaaaagctagtg
ttagtattggcaaatctgtttggaagaagactgcttccagcaaagttccaagataccact
ctcaagttttatcaatcaaaggtgttccttgaggatcttcctgaggattttaatgctgct
ttacatgagtataacatgaacgtgacaaaggactttgcctccttcctactaaatgtttct
aaattggctgatatgaaacaggaatatcaactcccattgtcaaaaataaatttcgcagga
aaagaatgtgaggactcccaactggtgtctcacctgatgaactgcaaagaaggaagagta
gctatttctccttttgtttacctctctggaaactctgatggtgatttgcttcagccaaat
actccaaaccatgtcgttctgcgtacaattggtattcatcacactcaggctcctgtgctg
tggtcacaggtgtttgataaccaaggaagaagaatgccacttaatgcttatgcacttgat
ttctataaacatggttccttgacaggactagtccaggacaacaggatgaatgaaggagct
gcttatcagttgttgaaggattttgcactgaccattcagtctatcagtgtttccttgcgt
gaactatgtgaaaatgaagatgacaatgtggtcttggcatttgaacaattgagtgaaacc
ttttttgaaaaatttaataaagtttaa
DBGET
integrated database retrieval system
